Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS18025

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
4,544,872	+		ABI39_RS18015	0.83	+0.4
4,544,954	+		ABI39_RS18015	0.88	-0.1
4,544,958	+		ABI39_RS18015	0.89	+0.8
4,545,084	-				+1.7
4,545,125	-				-0.4
4,545,129	+				+0.7
4,545,258	+		ABI39_RS18020	0.19	+0.8
4,545,296	+		ABI39_RS18020	0.34	-2.4
4,545,367	-		ABI39_RS18020	0.62	-0.3
4,545,372	-		ABI39_RS18020	0.64	+0.6
4,545,441	-				-1.1
4,545,457	+				+1.7
4,545,461	+				+0.9
4,545,462	-				+1.3
4,545,462	-				-0.2
4,545,462	-				-0.8
4,545,498	-				+1.5
4,545,514	-				-0.4
4,545,561	+				+0.7
4,545,568	-				-1.5
4,545,667	+				-0.8
4,545,708	+				-0.5
4,545,758	-				-0.4
4,545,788	+				+0.6
4,545,805	+				+0.4
4,545,816	+				-0.4
4,545,832	-				+0.2
4,545,892	-		ABI39_RS18025	0.30	-0.3
4,546,017	+				+0.5
4,546,022	+				+1.0
4,546,064	+				+2.2
4,546,075	+				-1.5
4,546,076	-				-1.3
4,546,076	-				-2.1
4,546,078	+				+1.1
4,546,079	-				-0.8
4,546,230	-				-0.3
4,546,232	-				-1.0
4,546,256	+				-0.7
4,546,257	-				-0.6
4,546,313	+				+0.3
4,546,316	-				-1.4
4,546,316	-				-0.8
4,546,429	+				-1.9
4,546,461	-				+1.4
4,546,465	+				+0.2
4,546,597	+				-0.6
4,546,794	+		ABI39_RS18035	0.15	+1.6
4,546,831	+		ABI39_RS18035	0.18	-0.1
4,546,848	-		ABI39_RS18035	0.19	+1.9
4,546,911	-		ABI39_RS18035	0.24	+2.9
4,546,997	+		ABI39_RS18035	0.31	+2.1
4,547,013	+		ABI39_RS18035	0.32	-0.5