Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15270

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
3,953,486	+		ABI39_RS15260	0.25	+3.8
3,953,599	+		ABI39_RS15260	0.61	-0.4
3,953,664	+		ABI39_RS15260	0.83	-0.4
3,953,674	+		ABI39_RS15260	0.86	-1.5
3,953,674	+		ABI39_RS15260	0.86	-0.5
3,953,841	+		ABI39_RS15265	0.22	+0.0
3,953,846	-		ABI39_RS15265	0.23	+0.7
3,953,897	+		ABI39_RS15265	0.32	-0.3
3,953,901	-		ABI39_RS15265	0.33	+0.4
3,954,021	+		ABI39_RS15265	0.54	+0.0
3,954,126	+		ABI39_RS15265	0.72	-1.0
3,954,126	+		ABI39_RS15265	0.72	-1.2
3,954,127	-		ABI39_RS15265	0.73	-1.6
3,954,185	-		ABI39_RS15265	0.83	-0.8
3,954,360	-				+1.9
3,954,511	+		ABI39_RS15270	0.11	+0.5
3,954,542	-		ABI39_RS15270	0.13	-0.5
3,954,585	-		ABI39_RS15270	0.15	+1.6
3,954,657	+		ABI39_RS15270	0.19	+1.4
3,954,751	+		ABI39_RS15270	0.23	+0.5
3,954,752	-		ABI39_RS15270	0.23	+0.6
3,954,754	+		ABI39_RS15270	0.23	-0.0
3,954,815	-		ABI39_RS15270	0.26	+2.0
3,954,847	+		ABI39_RS15270	0.28	+0.7
3,954,912	+		ABI39_RS15270	0.31	+0.0
3,954,936	-		ABI39_RS15270	0.33	+0.6
3,955,078	-		ABI39_RS15270	0.40	+1.8
3,955,087	-		ABI39_RS15270	0.40	+1.4
3,955,124	+		ABI39_RS15270	0.42	+1.3
3,955,125	-		ABI39_RS15270	0.42	-1.5
3,955,166	-		ABI39_RS15270	0.44	-0.1
3,955,264	+		ABI39_RS15270	0.49	+1.3
3,955,268	+		ABI39_RS15270	0.49	+0.4
3,955,275	+		ABI39_RS15270	0.50	+0.8
3,955,275	+		ABI39_RS15270	0.50	-1.5
3,955,287	+		ABI39_RS15270	0.50	-0.2
3,955,288	-		ABI39_RS15270	0.50	-0.4
3,955,342	-		ABI39_RS15270	0.53	+1.9
3,955,369	-		ABI39_RS15270	0.54	-0.3
3,955,389	+		ABI39_RS15270	0.55	-0.4
3,955,400	-		ABI39_RS15270	0.56	+0.1
3,955,409	+		ABI39_RS15270	0.56	-1.1
3,955,410	-		ABI39_RS15270	0.56	+0.9
3,955,655	+		ABI39_RS15270	0.69	+0.4
3,955,677	+		ABI39_RS15270	0.70	-0.2
3,955,704	+		ABI39_RS15270	0.71	-0.2
3,955,794	+		ABI39_RS15270	0.76	+0.2
3,955,892	-		ABI39_RS15270	0.80	-0.4
3,956,023	-		ABI39_RS15270	0.87	+0.9
3,956,044	-		ABI39_RS15270	0.88	+1.0
3,956,050	+		ABI39_RS15270	0.88	+1.0
3,956,174	+				-1.2
3,956,175	-				-0.8
3,956,272	-				+0.0
3,956,272	-				+0.8
3,956,442	+				+2.3
3,956,458	-				-1.1
3,956,493	-		ABI39_RS15275	0.13	+3.1
3,956,552	-		ABI39_RS15275	0.18	-0.3
3,956,586	+		ABI39_RS15275	0.21	+1.1
3,956,616	+		ABI39_RS15275	0.23	-1.6
3,956,617	-		ABI39_RS15275	0.23	+0.0
3,956,640	+		ABI39_RS15275	0.25	-0.4
3,956,674	-		ABI39_RS15275	0.28	+0.2
3,956,678	-		ABI39_RS15275	0.28	-1.6
3,956,789	+		ABI39_RS15275	0.38	+0.9
3,956,874	+		ABI39_RS15275	0.45	-1.7
3,956,874	+		ABI39_RS15275	0.45	+0.6
3,956,874	-		ABI39_RS15275	0.45	-0.1
3,956,906	-		ABI39_RS15275	0.48	+0.8
3,956,908	-		ABI39_RS15275	0.48	+0.0
3,956,998	-		ABI39_RS15275	0.56	+0.9
3,957,045	+		ABI39_RS15275	0.60	+0.4
3,957,050	-		ABI39_RS15275	0.60	-1.2
3,957,050	-		ABI39_RS15275	0.60	-1.5
3,957,050	-		ABI39_RS15275	0.60	-0.6
3,957,202	+		ABI39_RS15275	0.73	+0.7
3,957,214	+		ABI39_RS15275	0.74	-0.1
3,957,226	+		ABI39_RS15275	0.75	+0.6
3,957,227	-		ABI39_RS15275	0.75	-1.4