Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11385

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
3,025,627	-		ABI39_RS11375	0.69	+2.2
3,025,627	-		ABI39_RS11375	0.69	-1.0
3,025,630	+		ABI39_RS11375	0.69	-0.1
3,025,630	+		ABI39_RS11375	0.69	+1.2
3,025,714	-		ABI39_RS11375	0.82	-0.4
3,025,834	+				+0.6
3,025,847	+				-0.1
3,025,919	-				-0.4
3,026,023	+		ABI39_RS11380	0.25	+1.1
3,026,053	+		ABI39_RS11380	0.29	+1.2
3,026,054	-		ABI39_RS11380	0.30	+0.6
3,026,055	+		ABI39_RS11380	0.30	+1.3
3,026,140	-		ABI39_RS11380	0.43	-1.3
3,026,178	+		ABI39_RS11380	0.49	+0.9
3,026,179	-		ABI39_RS11380	0.49	+0.8
3,026,181	+		ABI39_RS11380	0.49	-1.6
3,026,181	+		ABI39_RS11380	0.49	+1.2
3,026,185	+		ABI39_RS11380	0.50	+2.0
3,026,186	-		ABI39_RS11380	0.50	+0.6
3,026,186	-		ABI39_RS11380	0.50	+1.5
3,026,193	-		ABI39_RS11380	0.51	+0.6
3,026,197	-		ABI39_RS11380	0.52	+0.5
3,026,359	-		ABI39_RS11380	0.77	+1.2
3,026,362	-		ABI39_RS11380	0.78	+0.4
3,026,362	-		ABI39_RS11380	0.78	-0.0
3,026,362	-		ABI39_RS11380	0.78	+0.3
3,026,384	-		ABI39_RS11380	0.81	+0.5
3,026,628	-				-1.1
3,026,653	+				+1.2
3,026,960	+		ABI39_RS11385	0.68	-0.8
3,026,964	+		ABI39_RS11385	0.69	+0.7
3,026,965	-		ABI39_RS11385	0.69	-0.1
3,027,035	-		ABI39_RS11385	0.84	-1.3
3,027,118	+				-0.4
3,027,118	+				-0.3
3,027,150	+				-0.7
3,027,177	+				-2.8
3,027,242	-				-0.5
3,027,318	+				-1.2
3,027,370	+				+0.1
3,027,383	-				-1.0
3,027,386	-				-2.2
3,027,386	-				-1.0
3,027,387	+				+0.3
3,027,393	-				+1.1
3,027,393	-				-1.7
3,027,407	+				+1.1
3,027,491	+		ABI39_RS11390	0.16	-0.6
3,027,492	-		ABI39_RS11390	0.16	+0.4
3,027,526	-		ABI39_RS11390	0.18	+0.1
3,027,612	-		ABI39_RS11390	0.24	+1.1
3,027,614	+		ABI39_RS11390	0.24	+0.2
3,027,640	-		ABI39_RS11390	0.26	-1.5
3,027,879	+		ABI39_RS11390	0.43	-1.3
3,027,884	+		ABI39_RS11390	0.44	-0.4
3,028,011	+		ABI39_RS11390	0.53	+0.7
3,028,012	-		ABI39_RS11390	0.53	+1.6
3,028,039	-		ABI39_RS11390	0.55	+2.6
3,028,039	-		ABI39_RS11390	0.55	-2.4
3,028,041	-		ABI39_RS11390	0.55	-1.2
3,028,041	-		ABI39_RS11390	0.55	+0.4
3,028,041	-		ABI39_RS11390	0.55	-0.3
3,028,041	-		ABI39_RS11390	0.55	-0.6
3,028,049	+		ABI39_RS11390	0.56	-0.5
3,028,050	-		ABI39_RS11390	0.56	-2.4
3,028,050	-		ABI39_RS11390	0.56	-2.0