Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19920

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
4,924,868	+		ABI39_RS19915	0.12	-0.1
4,924,869	-		ABI39_RS19915	0.12	-0.3
4,924,898	+		ABI39_RS19915	0.16	-0.4
4,924,913	+		ABI39_RS19915	0.17	-0.1
4,924,913	+		ABI39_RS19915	0.17	-0.2
4,924,914	-		ABI39_RS19915	0.17	-2.0
4,924,945	-		ABI39_RS19915	0.21	-1.8
4,924,956	-		ABI39_RS19915	0.22	-1.9
4,925,025	-		ABI39_RS19915	0.30	-1.4
4,925,043	-		ABI39_RS19915	0.32	-0.5
4,925,076	+		ABI39_RS19915	0.36	+0.0
4,925,130	-		ABI39_RS19915	0.43	-0.6
4,925,182	+		ABI39_RS19915	0.49	+0.6
4,925,253	+		ABI39_RS19915	0.57	+0.1
4,925,254	-		ABI39_RS19915	0.57	-1.2
4,925,254	-		ABI39_RS19915	0.57	-3.2
4,925,282	-		ABI39_RS19915	0.60	-0.9
4,925,282	-		ABI39_RS19915	0.60	-2.0
4,925,339	+		ABI39_RS19915	0.67	-1.0
4,925,340	-		ABI39_RS19915	0.67	-1.0
4,925,432	-		ABI39_RS19915	0.78	+1.4
4,925,432	-		ABI39_RS19915	0.78	-2.2
4,925,461	-		ABI39_RS19915	0.81	-1.6
4,925,477	+		ABI39_RS19915	0.83	-1.3
4,925,516	+		ABI39_RS19915	0.88	-0.2
4,925,661	+				-2.2
4,925,674	-				-2.5
4,925,725	+		ABI39_RS19920	0.17	-3.6
4,925,846	+		ABI39_RS19920	0.38	+0.1
4,925,847	-		ABI39_RS19920	0.38	-4.4
4,925,996	-		ABI39_RS19920	0.63	-3.8
4,926,046	+		ABI39_RS19920	0.72	-1.1
4,926,051	-		ABI39_RS19920	0.73	-5.6
4,926,058	-		ABI39_RS19920	0.74	-3.2
4,926,098	+		ABI39_RS19920	0.81	-1.4
4,926,099	-		ABI39_RS19920	0.81	-3.0
4,926,219	-				-5.5
4,926,223	+				+1.9
4,926,224	-				-3.2
4,926,225	+				-0.3
4,926,227	+				-0.2
4,926,229	+				+0.3
4,926,230	-				-2.4
4,926,233	-				-3.9
4,926,258	+				-4.4
4,926,264	+				-5.2
4,926,265	-				-4.9
4,926,339	-		ABI39_RS19925	0.12	-4.0
4,926,523	-		ABI39_RS19925	0.37	-2.4
4,926,724	+		ABI39_RS19925	0.65	-4.4
4,926,802	-		ABI39_RS19925	0.76	-1.9
4,926,858	+		ABI39_RS19925	0.84	-5.6
4,926,868	-		ABI39_RS19925	0.85	-2.6
4,927,002	+				-4.6
4,927,003	-				-3.3
4,927,060	-		ABI39_RS19930	0.10	-4.4
4,927,180	-		ABI39_RS19930	0.26	-2.7