Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12415

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
3,269,011	-		ABI39_RS12410	0.28	+1.4
3,269,040	-		ABI39_RS12410	0.31	+1.6
3,269,159	+		ABI39_RS12410	0.41	+1.4
3,269,299	+		ABI39_RS12410	0.53	+0.8
3,269,300	-		ABI39_RS12410	0.53	-0.2
3,269,300	-		ABI39_RS12410	0.53	+1.2
3,269,321	+		ABI39_RS12410	0.55	+3.2
3,269,447	-		ABI39_RS12410	0.66	+1.0
3,269,737	-				+2.6
3,269,743	-				+1.4
3,269,846	+				+0.4
3,269,955	+		ABI39_RS12415	0.25	-1.7
3,270,025	+		ABI39_RS12415	0.42	-2.1
3,270,025	+		ABI39_RS12415	0.42	-3.6
3,270,085	+		ABI39_RS12415	0.56	-1.6
3,270,091	-		ABI39_RS12415	0.57	-3.6
3,270,218	-		ABI39_RS12415	0.86	-3.9
3,270,237	+				-2.0
3,270,239	+				-1.2
3,270,240	-				-1.2
3,270,260	+				-1.8
3,270,264	+				-1.6
3,270,332	-				-0.6
3,270,355	+				-3.2
3,270,356	-				+0.0
3,270,397	-		ABI39_RS12420	0.10	-1.2
3,270,627	-		ABI39_RS12420	0.35	-3.7
3,270,708	+		ABI39_RS12420	0.44	-3.7
3,270,712	+		ABI39_RS12420	0.44	-0.8
3,270,712	+		ABI39_RS12420	0.44	-3.2
3,270,773	-		ABI39_RS12420	0.51	-2.9
3,270,773	-		ABI39_RS12420	0.51	-4.0
3,270,789	+		ABI39_RS12420	0.53	-3.1
3,270,842	-		ABI39_RS12420	0.58	-2.6
3,270,960	+		ABI39_RS12420	0.71	-2.0
3,270,961	-		ABI39_RS12420	0.71	-1.3
3,271,177	-				-3.7
3,271,177	-				-2.2
3,271,213	-				-2.3