Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10840

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
2,901,876	+		ABI39_RS10835	0.67	+0.3
2,901,878	+		ABI39_RS10835	0.67	-0.3
2,901,878	+		ABI39_RS10835	0.67	+0.6
2,901,878	+		ABI39_RS10835	0.67	+1.9
2,901,879	-		ABI39_RS10835	0.67	+0.5
2,901,879	-		ABI39_RS10835	0.67	-0.1
2,901,910	-		ABI39_RS10835	0.69	+1.0
2,901,925	-		ABI39_RS10835	0.69	+1.2
2,901,926	+		ABI39_RS10835	0.69	-1.0
2,901,957	+		ABI39_RS10835	0.71	+0.4
2,902,069	-		ABI39_RS10835	0.75	+1.1
2,902,095	+		ABI39_RS10835	0.76	-0.4
2,902,095	+		ABI39_RS10835	0.76	+1.4
2,902,108	+		ABI39_RS10835	0.77	-0.7
2,902,108	+		ABI39_RS10835	0.77	+0.6
2,902,136	-		ABI39_RS10835	0.78	-0.5
2,902,258	-		ABI39_RS10835	0.83	-2.1
2,902,486	-				+1.0
2,902,563	+				-0.3
2,902,564	-				-1.0
2,902,627	+				+0.5
2,902,671	+				+0.1
2,902,671	+				+0.2
2,902,673	+				+0.3
2,902,821	+				+0.1
2,902,830	-				-1.7
2,902,856	+				-0.5
2,902,926	-				+0.5
2,903,064	+		ABI39_RS10840	0.18	-0.0
2,903,175	-		ABI39_RS10840	0.28	+1.3
2,903,288	+		ABI39_RS10840	0.38	+0.5
2,903,420	+		ABI39_RS10840	0.50	+1.3
2,903,579	-		ABI39_RS10840	0.65	+0.6
2,903,608	-		ABI39_RS10840	0.68	+1.4
2,903,625	-		ABI39_RS10840	0.69	+3.1
2,903,656	+		ABI39_RS10840	0.72	-0.6
2,903,657	-		ABI39_RS10840	0.72	-0.7
2,903,769	-		ABI39_RS10840	0.82	+0.7
2,903,769	-		ABI39_RS10840	0.82	+0.1
2,903,879	-				+0.8
2,903,883	+				-0.6
2,903,883	+				+0.4
2,903,884	-				-2.7
2,903,895	+				-0.2
2,903,900	+				+1.3
2,903,901	-				-0.3
2,903,901	-				+0.2
2,903,927	-				-0.3
2,903,927	-				+0.9
2,903,946	+				+1.2
2,903,946	+				+0.4
2,904,066	+		ABI39_RS10845	0.14	+1.8
2,904,251	+		ABI39_RS10845	0.47	-0.0
2,904,253	+		ABI39_RS10845	0.48	+0.2
2,904,254	-		ABI39_RS10845	0.48	+0.0
2,904,261	-		ABI39_RS10845	0.49	+1.8
2,904,360	-		ABI39_RS10845	0.67	+1.4
2,904,419	-		ABI39_RS10845	0.77	+0.5
2,904,423	-		ABI39_RS10845	0.78	-0.0
2,904,574	-				-0.1
2,904,732	+				-0.3
2,904,811	+		ABI39_RS10850	0.15	-0.3
2,904,829	+		ABI39_RS10850	0.16	+0.3
2,904,937	-		ABI39_RS10850	0.24	+0.9