Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10335

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
2,761,255	+		ABI39_RS10330	0.62	-0.2
2,761,269	-		ABI39_RS10330	0.62	+0.2
2,761,355	+		ABI39_RS10330	0.67	-0.5
2,761,356	-		ABI39_RS10330	0.67	+1.2
2,761,356	-		ABI39_RS10330	0.67	+0.2
2,761,356	-		ABI39_RS10330	0.67	+0.0
2,761,425	+		ABI39_RS10330	0.70	+0.3
2,761,428	+		ABI39_RS10330	0.70	-0.2
2,761,429	-		ABI39_RS10330	0.70	-1.1
2,761,512	-		ABI39_RS10330	0.74	-1.2
2,761,804	+		ABI39_RS10330	0.89	-0.9
2,761,983	-				-0.3
2,761,998	-				+0.4
2,762,115	-		ABI39_RS10335	0.10	-0.8
2,762,159	-		ABI39_RS10335	0.19	+0.3
2,762,161	-		ABI39_RS10335	0.19	+0.6
2,762,175	-		ABI39_RS10335	0.22	+0.8
2,762,189	+		ABI39_RS10335	0.25	-0.4
2,762,301	+		ABI39_RS10335	0.47	+0.6
2,762,302	-		ABI39_RS10335	0.47	+1.6
2,762,305	-		ABI39_RS10335	0.48	+1.4
2,762,323	-		ABI39_RS10335	0.51	+0.0
2,762,323	-		ABI39_RS10335	0.51	-1.3
2,762,329	-		ABI39_RS10335	0.53	-0.1
2,762,329	-		ABI39_RS10335	0.53	-0.2
2,762,329	-		ABI39_RS10335	0.53	+0.3
2,762,417	+		ABI39_RS10335	0.70	-0.1
2,762,417	+		ABI39_RS10335	0.70	-0.1
2,762,417	+		ABI39_RS10335	0.70	+1.5
2,762,418	-		ABI39_RS10335	0.70	+2.4
2,762,418	-		ABI39_RS10335	0.70	+0.6
2,762,421	+		ABI39_RS10335	0.71	+1.6
2,762,435	+		ABI39_RS10335	0.74	-0.3
2,762,509	-		ABI39_RS10335	0.89	+0.1
2,762,653	-				+1.7
2,762,672	+				-0.3
2,762,748	-				-1.0
2,762,772	-				+1.5
2,762,884	+		ABI39_RS10340	0.18	+0.6
2,762,932	+		ABI39_RS10340	0.22	-0.3
2,762,960	-		ABI39_RS10340	0.24	-0.7
2,763,328	-		ABI39_RS10340	0.54	-1.6
2,763,360	+		ABI39_RS10340	0.57	-0.8
2,763,361	-		ABI39_RS10340	0.57	+0.8
2,763,439	-		ABI39_RS10340	0.63	-0.2
2,763,456	-		ABI39_RS10340	0.64	-0.3
2,763,494	+		ABI39_RS10340	0.67	-0.9
2,763,494	+		ABI39_RS10340	0.67	-1.5
2,763,494	+		ABI39_RS10340	0.67	+0.2
2,763,495	-		ABI39_RS10340	0.67	-0.7
2,763,502	-		ABI39_RS10340	0.68	+0.3