Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10260

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
2,734,990	+		ABI39_RS10250	0.40	-0.6
2,734,991	-		ABI39_RS10250	0.40	+0.8
2,734,996	+		ABI39_RS10250	0.41	-2.8
2,735,853	+		ABI39_RS10255	0.87	-0.8
2,735,998	-				-3.4
2,736,017	+				-4.5
2,736,020	+				-5.0
2,736,021	-				-4.1
2,736,021	-				-4.4
2,736,080	-		ABI39_RS10260	0.12	-5.5
2,736,132	+		ABI39_RS10260	0.16	-5.8
2,736,280	+		ABI39_RS10260	0.27	-1.0
2,736,280	+		ABI39_RS10260	0.27	-3.7
2,736,328	-		ABI39_RS10260	0.31	-4.7
2,736,465	+		ABI39_RS10260	0.42	-3.8
2,736,707	+		ABI39_RS10260	0.61	-3.7
2,736,811	+		ABI39_RS10260	0.69	-5.2
2,736,811	+		ABI39_RS10260	0.69	-2.8
2,736,812	-		ABI39_RS10260	0.69	-3.9
2,736,876	+		ABI39_RS10260	0.74	-4.2
2,736,998	-		ABI39_RS10260	0.84	-2.8
2,737,025	+		ABI39_RS10260	0.86	-5.9
2,737,026	-		ABI39_RS10260	0.86	-3.8
2,737,105	+				-3.4
2,737,202	-				-0.0
2,737,220	-				-0.6
2,737,224	+				+0.4
2,737,236	-				-1.3
2,737,335	-				-0.9
2,737,342	+				-0.0
2,737,343	-				-0.7
2,737,343	-				+0.7
2,737,425	+				+1.3
2,737,426	-				+0.9
2,737,426	-				-0.1
2,737,727	+		ABI39_RS10265	0.28	+0.0
2,737,814	+		ABI39_RS10265	0.39	+0.3
2,737,873	+		ABI39_RS10265	0.46	-1.1
2,737,970	+		ABI39_RS10265	0.58	-0.7
2,738,174	+		ABI39_RS10265	0.83	+1.2
2,738,179	-		ABI39_RS10265	0.84	-0.3
2,738,200	+		ABI39_RS10265	0.87	+0.3