Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07095

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
1,954,980	+		ABI39_RS07085	0.72	-0.6
1,955,181	-				-6.2
1,955,186	-				-6.3
1,955,374	-		ABI39_RS07090	0.29	-2.8
1,955,380	+		ABI39_RS07090	0.30	+0.3
1,955,444	-		ABI39_RS07090	0.46	-5.7
1,955,446	-		ABI39_RS07090	0.46	-6.4
1,955,734	+				-6.1
1,955,765	+				-5.2
1,955,765	+				-4.2
1,955,765	+				-4.4
1,955,766	-				-1.1
1,955,766	-				-3.4
1,955,803	+				-6.0
1,955,876	-		ABI39_RS07095	0.15	-5.2
1,955,880	-		ABI39_RS07095	0.15	-4.9
1,955,907	+		ABI39_RS07095	0.17	-4.6
1,955,908	-		ABI39_RS07095	0.17	-5.3
1,955,908	-		ABI39_RS07095	0.17	-3.9
1,955,920	+		ABI39_RS07095	0.18	-5.1
1,955,920	+		ABI39_RS07095	0.18	-5.9
1,955,921	-		ABI39_RS07095	0.18	-3.7
1,955,931	+		ABI39_RS07095	0.19	-2.4
1,955,932	-		ABI39_RS07095	0.19	-3.5
1,956,040	+		ABI39_RS07095	0.27	-4.8
1,956,041	-		ABI39_RS07095	0.27	-3.1
1,956,118	+		ABI39_RS07095	0.33	-0.8
1,956,142	+		ABI39_RS07095	0.35	-6.9
1,956,142	+		ABI39_RS07095	0.35	-4.0
1,956,194	+		ABI39_RS07095	0.38	-4.5
1,956,319	+		ABI39_RS07095	0.48	-4.5
1,956,347	+		ABI39_RS07095	0.50	-4.3
1,956,347	+		ABI39_RS07095	0.50	-2.4
1,956,347	+		ABI39_RS07095	0.50	-4.4
1,956,347	+		ABI39_RS07095	0.50	-4.9
1,956,348	-		ABI39_RS07095	0.50	-5.1
1,956,348	-		ABI39_RS07095	0.50	-5.6
1,956,348	-		ABI39_RS07095	0.50	-5.0
1,956,349	+		ABI39_RS07095	0.50	-4.4
1,956,357	+		ABI39_RS07095	0.51	-6.5
1,956,392	-		ABI39_RS07095	0.53	-5.4
1,956,416	-		ABI39_RS07095	0.55	-4.5
1,956,518	-		ABI39_RS07095	0.63	-3.7
1,956,520	+		ABI39_RS07095	0.63	-5.4
1,956,580	-		ABI39_RS07095	0.67	-5.2
1,956,655	-		ABI39_RS07095	0.73	-4.3
1,956,713	+		ABI39_RS07095	0.77	-4.8
1,956,745	+		ABI39_RS07095	0.80	-4.4
1,956,745	+		ABI39_RS07095	0.80	-3.5
1,956,765	-		ABI39_RS07095	0.81	-5.4
1,956,771	-		ABI39_RS07095	0.82	-5.6
1,956,772	+		ABI39_RS07095	0.82	-4.3
1,956,773	-		ABI39_RS07095	0.82	-5.4
1,956,774	+		ABI39_RS07095	0.82	-5.7
1,956,775	-		ABI39_RS07095	0.82	-4.4
1,956,775	-		ABI39_RS07095	0.82	-5.7
1,956,779	-		ABI39_RS07095	0.82	-5.2
1,956,834	-		ABI39_RS07095	0.86	-3.6
1,956,834	-		ABI39_RS07095	0.86	-2.5
1,956,836	-		ABI39_RS07095	0.86	-5.2
1,956,889	-				-3.5
1,956,889	-				-4.2
1,956,889	-				-2.7
1,956,896	-				-3.3
1,956,907	+				-0.8
1,956,911	-				-3.9
1,956,912	+				-5.9
1,956,913	-				-2.7
1,956,913	-				-2.2
1,956,961	-				-3.6
1,957,027	-				-1.7
1,957,091	-				-1.4
1,957,091	-				-0.0
1,957,189	-		ABI39_RS07100	0.15	+1.2
1,957,238	-		ABI39_RS07100	0.20	+1.2
1,957,266	+		ABI39_RS07100	0.23	-0.6
1,957,448	-		ABI39_RS07100	0.41	-2.4
1,957,508	+		ABI39_RS07100	0.47	-0.1
1,957,531	+		ABI39_RS07100	0.49	+0.1
1,957,566	+		ABI39_RS07100	0.53	+0.0
1,957,567	-		ABI39_RS07100	0.53	+0.6
1,957,572	-		ABI39_RS07100	0.53	-0.3
1,957,632	+		ABI39_RS07100	0.59	+0.1
1,957,815	+		ABI39_RS07100	0.78	-0.3
1,957,820	+		ABI39_RS07100	0.78	+0.4
1,957,923	+		ABI39_RS07100	0.89	-0.2
1,957,990	-				-0.1