Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06250

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
1,732,149	-		ABI39_RS06245	0.23	+1.4
1,732,206	-		ABI39_RS06245	0.28	+0.7
1,732,727	-		ABI39_RS06245	0.79	-0.8
1,732,947	-				+0.0
1,733,001	+				-0.6
1,733,002	-				-0.8
1,733,082	-				-2.6
1,733,082	-				-1.3
1,733,083	+				-2.1
1,733,086	-				-3.5
1,733,086	-				-2.5
1,733,414	-		ABI39_RS06250	0.35	-1.9
1,733,557	+		ABI39_RS06250	0.49	-2.3
1,733,666	-		ABI39_RS06250	0.60	-1.8
1,733,683	-		ABI39_RS06250	0.62	-0.4
1,733,746	+		ABI39_RS06250	0.68	-2.4
1,733,815	-		ABI39_RS06250	0.74	-3.0
1,733,876	-		ABI39_RS06250	0.80	-2.6
1,733,887	+		ABI39_RS06250	0.81	-2.2
1,733,887	+		ABI39_RS06250	0.81	-3.0
1,733,890	-		ABI39_RS06250	0.82	-1.7
1,733,972	+		ABI39_RS06250	0.90	-3.2
1,733,972	+		ABI39_RS06250	0.90	-3.1
1,733,972	+		ABI39_RS06250	0.90	-1.1
1,734,223	+				+0.1
1,734,271	-				+1.1
1,734,329	+				+1.5
1,734,441	-		ABI39_RS06255	0.21	+1.1
1,734,499	+		ABI39_RS06255	0.27	+0.1
1,734,507	-		ABI39_RS06255	0.28	+1.9
1,734,507	-		ABI39_RS06255	0.28	+0.4
1,734,576	+		ABI39_RS06255	0.35	-0.6
1,734,620	-		ABI39_RS06255	0.39	-0.6
1,734,620	-		ABI39_RS06255	0.39	+2.3
1,734,621	+		ABI39_RS06255	0.39	-0.9
1,734,622	-		ABI39_RS06255	0.39	+2.0
1,734,664	+		ABI39_RS06255	0.44	+1.4
1,734,689	+		ABI39_RS06255	0.46	+0.9
1,734,728	+		ABI39_RS06255	0.50	-0.5
1,734,728	+		ABI39_RS06255	0.50	-1.5
1,734,729	-		ABI39_RS06255	0.51	+1.4
1,734,785	-		ABI39_RS06255	0.56	+0.7
1,734,807	+		ABI39_RS06255	0.59	-0.2
1,734,824	-		ABI39_RS06255	0.60	-1.5
1,734,846	+		ABI39_RS06255	0.63	-0.3
1,734,851	+		ABI39_RS06255	0.63	-0.1
1,734,976	+		ABI39_RS06255	0.76	-0.9
1,734,976	+		ABI39_RS06255	0.76	-0.0
1,734,980	+		ABI39_RS06255	0.77	+0.2