Experiment: RB51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt entF and ybdZ overlap by 4 nucleotides ybdZ and fes are separated by 2 nucleotides
NOLOHH_23985: entF - enterobactin synthase multienzyme complex component, ATP-dependent, at 4,721,810 to 4,725,691
entF
NOLOHH_23990: ybdZ - enterobactin biosynthesis protein YbdZ, at 4,725,688 to 4,725,906
ybdZ
NOLOHH_23995: fes - enterobactin/ferric enterobactin esterase, at 4,725,909 to 4,727,111
fes
Position (kb)
4725
4726 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4724.715 kb on + strand, within entF at 4724.872 kb on + strand, within entF at 4724.872 kb on + strand, within entF at 4724.873 kb on - strand, within entF at 4724.886 kb on + strand, within entF at 4724.887 kb on - strand, within entF at 4725.022 kb on + strand, within entF at 4725.023 kb on - strand, within entF at 4725.023 kb on - strand, within entF at 4725.023 kb on - strand, within entF at 4725.161 kb on + strand, within entF at 4725.226 kb on + strand, within entF at 4725.323 kb on + strand at 4725.324 kb on - strand at 4725.324 kb on - strand at 4725.324 kb on - strand at 4725.324 kb on - strand at 4725.324 kb on - strand at 4725.421 kb on + strand at 4725.497 kb on - strand at 4725.523 kb on + strand at 4725.523 kb on + strand at 4725.523 kb on + strand at 4725.523 kb on + strand at 4725.524 kb on - strand at 4725.587 kb on + strand at 4725.588 kb on - strand at 4725.678 kb on - strand at 4725.733 kb on - strand, within ybdZ at 4725.864 kb on - strand, within ybdZ at 4725.894 kb on + strand at 4726.036 kb on - strand, within fes at 4726.036 kb on - strand, within fes at 4726.150 kb on - strand, within fes at 4726.207 kb on - strand, within fes at 4726.210 kb on - strand, within fes at 4726.320 kb on - strand, within fes at 4726.426 kb on + strand, within fes at 4726.426 kb on + strand, within fes at 4726.427 kb on - strand, within fes at 4726.488 kb on - strand, within fes at 4726.756 kb on - strand, within fes at 4726.833 kb on - strand, within fes
Per-strain Table
Position Strand Gene LocusTag Fraction RB51 remove 4,724,715 + entF NOLOHH_23985 0.75 -0.3 4,724,872 + entF NOLOHH_23985 0.79 +1.5 4,724,872 + entF NOLOHH_23985 0.79 -0.4 4,724,873 - entF NOLOHH_23985 0.79 -0.2 4,724,886 + entF NOLOHH_23985 0.79 -0.1 4,724,887 - entF NOLOHH_23985 0.79 -0.0 4,725,022 + entF NOLOHH_23985 0.83 +0.0 4,725,023 - entF NOLOHH_23985 0.83 -0.8 4,725,023 - entF NOLOHH_23985 0.83 -0.5 4,725,023 - entF NOLOHH_23985 0.83 +0.3 4,725,161 + entF NOLOHH_23985 0.86 -0.1 4,725,226 + entF NOLOHH_23985 0.88 -0.5 4,725,323 + +0.4 4,725,324 - -1.1 4,725,324 - +0.4 4,725,324 - -0.1 4,725,324 - +0.0 4,725,324 - -0.2 4,725,421 + +0.3 4,725,497 - +0.8 4,725,523 + -0.6 4,725,523 + -0.0 4,725,523 + -2.1 4,725,523 + +0.7 4,725,524 - -0.1 4,725,587 + +0.4 4,725,588 - +0.3 4,725,678 - -1.9 4,725,733 - ybdZ NOLOHH_23990 0.21 -1.2 4,725,864 - ybdZ NOLOHH_23990 0.80 -0.6 4,725,894 + -1.4 4,726,036 - fes NOLOHH_23995 0.11 -0.4 4,726,036 - fes NOLOHH_23995 0.11 -1.1 4,726,150 - fes NOLOHH_23995 0.20 -0.3 4,726,207 - fes NOLOHH_23995 0.25 +1.2 4,726,210 - fes NOLOHH_23995 0.25 -0.5 4,726,320 - fes NOLOHH_23995 0.34 +0.9 4,726,426 + fes NOLOHH_23995 0.43 -1.1 4,726,426 + fes NOLOHH_23995 0.43 -1.0 4,726,427 - fes NOLOHH_23995 0.43 +0.9 4,726,488 - fes NOLOHH_23995 0.48 -1.5 4,726,756 - fes NOLOHH_23995 0.70 +2.6 4,726,833 - fes NOLOHH_23995 0.77 -0.6
Or see this region's nucleotide sequence