Strain Fitness in Escherichia coli ECOR27 around NOLOHH_23990

Experiment: RB51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntentF and ybdZ overlap by 4 nucleotidesybdZ and fes are separated by 2 nucleotides NOLOHH_23985: entF - enterobactin synthase multienzyme complex component, ATP-dependent, at 4,721,810 to 4,725,691 entF NOLOHH_23990: ybdZ - enterobactin biosynthesis protein YbdZ, at 4,725,688 to 4,725,906 ybdZ NOLOHH_23995: fes - enterobactin/ferric enterobactin esterase, at 4,725,909 to 4,727,111 fes Position (kb) 4725 4726Strain fitness (log2 ratio) -2 -1 0 1 2at 4724.715 kb on + strand, within entFat 4724.872 kb on + strand, within entFat 4724.872 kb on + strand, within entFat 4724.873 kb on - strand, within entFat 4724.886 kb on + strand, within entFat 4724.887 kb on - strand, within entFat 4725.022 kb on + strand, within entFat 4725.023 kb on - strand, within entFat 4725.023 kb on - strand, within entFat 4725.023 kb on - strand, within entFat 4725.161 kb on + strand, within entFat 4725.226 kb on + strand, within entFat 4725.323 kb on + strandat 4725.324 kb on - strandat 4725.324 kb on - strandat 4725.324 kb on - strandat 4725.324 kb on - strandat 4725.324 kb on - strandat 4725.421 kb on + strandat 4725.497 kb on - strandat 4725.523 kb on + strandat 4725.523 kb on + strandat 4725.523 kb on + strandat 4725.523 kb on + strandat 4725.524 kb on - strandat 4725.587 kb on + strandat 4725.588 kb on - strandat 4725.678 kb on - strandat 4725.733 kb on - strand, within ybdZat 4725.864 kb on - strand, within ybdZat 4725.894 kb on + strandat 4726.036 kb on - strand, within fesat 4726.036 kb on - strand, within fesat 4726.150 kb on - strand, within fesat 4726.207 kb on - strand, within fesat 4726.210 kb on - strand, within fesat 4726.320 kb on - strand, within fesat 4726.426 kb on + strand, within fesat 4726.426 kb on + strand, within fesat 4726.427 kb on - strand, within fesat 4726.488 kb on - strand, within fesat 4726.756 kb on - strand, within fesat 4726.833 kb on - strand, within fes

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Per-strain Table

Position Strand Gene LocusTag Fraction RB51
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4,724,715 + entF NOLOHH_23985 0.75 -0.3
4,724,872 + entF NOLOHH_23985 0.79 +1.5
4,724,872 + entF NOLOHH_23985 0.79 -0.4
4,724,873 - entF NOLOHH_23985 0.79 -0.2
4,724,886 + entF NOLOHH_23985 0.79 -0.1
4,724,887 - entF NOLOHH_23985 0.79 -0.0
4,725,022 + entF NOLOHH_23985 0.83 +0.0
4,725,023 - entF NOLOHH_23985 0.83 -0.8
4,725,023 - entF NOLOHH_23985 0.83 -0.5
4,725,023 - entF NOLOHH_23985 0.83 +0.3
4,725,161 + entF NOLOHH_23985 0.86 -0.1
4,725,226 + entF NOLOHH_23985 0.88 -0.5
4,725,323 + +0.4
4,725,324 - -1.1
4,725,324 - +0.4
4,725,324 - -0.1
4,725,324 - +0.0
4,725,324 - -0.2
4,725,421 + +0.3
4,725,497 - +0.8
4,725,523 + -0.6
4,725,523 + -0.0
4,725,523 + -2.1
4,725,523 + +0.7
4,725,524 - -0.1
4,725,587 + +0.4
4,725,588 - +0.3
4,725,678 - -1.9
4,725,733 - ybdZ NOLOHH_23990 0.21 -1.2
4,725,864 - ybdZ NOLOHH_23990 0.80 -0.6
4,725,894 + -1.4
4,726,036 - fes NOLOHH_23995 0.11 -0.4
4,726,036 - fes NOLOHH_23995 0.11 -1.1
4,726,150 - fes NOLOHH_23995 0.20 -0.3
4,726,207 - fes NOLOHH_23995 0.25 +1.2
4,726,210 - fes NOLOHH_23995 0.25 -0.5
4,726,320 - fes NOLOHH_23995 0.34 +0.9
4,726,426 + fes NOLOHH_23995 0.43 -1.1
4,726,426 + fes NOLOHH_23995 0.43 -1.0
4,726,427 - fes NOLOHH_23995 0.43 +0.9
4,726,488 - fes NOLOHH_23995 0.48 -1.5
4,726,756 - fes NOLOHH_23995 0.70 +2.6
4,726,833 - fes NOLOHH_23995 0.77 -0.6

Or see this region's nucleotide sequence