Experiment: RB51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_22790 and NOLOHH_22795 are separated by 121 nucleotides NOLOHH_22795 and NOLOHH_22800 are separated by 89 nucleotides
NOLOHH_22790: NOLOHH_22790 - phage head-binding domain-containing protein, at 4,500,137 to 4,502,116
_22790
NOLOHH_22795: NOLOHH_22795 - toxin-antitoxin system HicB family antitoxin, at 4,502,238 to 4,502,498
_22795
NOLOHH_22800: NOLOHH_22800 - DNA transfer protein, at 4,502,588 to 4,504,585
_22800
Position (kb)
4502
4503 Strain fitness (log2 ratio)
-1
0
1
2 at 4501.315 kb on + strand, within NOLOHH_22790 at 4501.404 kb on - strand, within NOLOHH_22790 at 4501.410 kb on + strand, within NOLOHH_22790 at 4501.584 kb on + strand, within NOLOHH_22790 at 4501.849 kb on + strand, within NOLOHH_22790 at 4501.849 kb on + strand, within NOLOHH_22790 at 4501.891 kb on + strand, within NOLOHH_22790 at 4501.892 kb on - strand, within NOLOHH_22790 at 4501.893 kb on + strand, within NOLOHH_22790 at 4501.893 kb on + strand, within NOLOHH_22790 at 4501.893 kb on + strand, within NOLOHH_22790 at 4501.894 kb on - strand, within NOLOHH_22790 at 4502.022 kb on + strand at 4502.047 kb on + strand at 4502.048 kb on - strand at 4502.138 kb on + strand at 4502.139 kb on - strand at 4502.190 kb on - strand at 4502.241 kb on + strand at 4502.242 kb on - strand at 4502.303 kb on + strand, within NOLOHH_22795 at 4502.476 kb on + strand at 4502.476 kb on + strand at 4502.477 kb on - strand at 4502.477 kb on - strand at 4502.477 kb on - strand at 4502.479 kb on - strand at 4502.549 kb on + strand at 4502.553 kb on + strand at 4502.589 kb on + strand at 4502.612 kb on - strand at 4502.743 kb on + strand at 4502.743 kb on + strand at 4502.921 kb on - strand, within NOLOHH_22800 at 4502.921 kb on - strand, within NOLOHH_22800 at 4503.056 kb on - strand, within NOLOHH_22800 at 4503.057 kb on + strand, within NOLOHH_22800 at 4503.058 kb on - strand, within NOLOHH_22800 at 4503.058 kb on - strand, within NOLOHH_22800 at 4503.058 kb on - strand, within NOLOHH_22800 at 4503.092 kb on + strand, within NOLOHH_22800 at 4503.183 kb on + strand, within NOLOHH_22800 at 4503.184 kb on - strand, within NOLOHH_22800 at 4503.218 kb on - strand, within NOLOHH_22800 at 4503.273 kb on + strand, within NOLOHH_22800 at 4503.274 kb on - strand, within NOLOHH_22800 at 4503.274 kb on - strand, within NOLOHH_22800 at 4503.363 kb on - strand, within NOLOHH_22800 at 4503.485 kb on - strand, within NOLOHH_22800 at 4503.488 kb on + strand, within NOLOHH_22800
Per-strain Table
Position Strand Gene LocusTag Fraction RB51 remove 4,501,315 + NOLOHH_22790 0.59 +0.9 4,501,404 - NOLOHH_22790 0.64 +0.8 4,501,410 + NOLOHH_22790 0.64 +1.0 4,501,584 + NOLOHH_22790 0.73 +0.5 4,501,849 + NOLOHH_22790 0.86 -0.0 4,501,849 + NOLOHH_22790 0.86 +0.1 4,501,891 + NOLOHH_22790 0.89 +0.4 4,501,892 - NOLOHH_22790 0.89 -0.9 4,501,893 + NOLOHH_22790 0.89 -0.3 4,501,893 + NOLOHH_22790 0.89 -1.4 4,501,893 + NOLOHH_22790 0.89 +0.5 4,501,894 - NOLOHH_22790 0.89 -1.1 4,502,022 + -0.8 4,502,047 + +0.6 4,502,048 - +0.7 4,502,138 + +1.6 4,502,139 - +0.7 4,502,190 - -0.2 4,502,241 + -1.5 4,502,242 - -0.7 4,502,303 + NOLOHH_22795 0.25 -1.1 4,502,476 + -0.2 4,502,476 + -0.4 4,502,477 - -0.1 4,502,477 - +0.8 4,502,477 - -0.2 4,502,479 - -1.1 4,502,549 + +0.6 4,502,553 + +0.6 4,502,589 + +0.3 4,502,612 - +0.6 4,502,743 + +0.6 4,502,743 + +0.2 4,502,921 - NOLOHH_22800 0.17 -0.4 4,502,921 - NOLOHH_22800 0.17 -0.5 4,503,056 - NOLOHH_22800 0.23 -0.5 4,503,057 + NOLOHH_22800 0.23 +0.4 4,503,058 - NOLOHH_22800 0.24 +0.3 4,503,058 - NOLOHH_22800 0.24 -0.9 4,503,058 - NOLOHH_22800 0.24 -1.2 4,503,092 + NOLOHH_22800 0.25 -0.8 4,503,183 + NOLOHH_22800 0.30 +0.6 4,503,184 - NOLOHH_22800 0.30 +1.8 4,503,218 - NOLOHH_22800 0.32 +0.2 4,503,273 + NOLOHH_22800 0.34 -0.1 4,503,274 - NOLOHH_22800 0.34 +1.7 4,503,274 - NOLOHH_22800 0.34 +0.0 4,503,363 - NOLOHH_22800 0.39 +1.5 4,503,485 - NOLOHH_22800 0.45 +0.2 4,503,488 + NOLOHH_22800 0.45 +0.5
Or see this region's nucleotide sequence