Experiment: RB51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiQ and yeiP are separated by 222 nucleotides yeiP and yeiW are separated by 154 nucleotides yeiW and setB overlap by 4 nucleotides
NOLOHH_14990: yeiQ - Uncharacterized oxidoreductase YeiQ, at 2,936,505 to 2,937,971
yeiQ
NOLOHH_14995: yeiP - elongation factor P-like protein YeiP, at 2,938,194 to 2,938,766
yeiP
NOLOHH_15000: yeiW - UPF0153 protein YeiW, at 2,938,921 to 2,939,175
yeiW
NOLOHH_15005: setB - sugar efflux transporter SetB, at 2,939,172 to 2,940,353
setB
Position (kb)
2938
2939
2940 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2937.933 kb on + strand at 2937.933 kb on + strand at 2937.934 kb on - strand at 2938.212 kb on - strand at 2938.212 kb on - strand at 2938.214 kb on - strand at 2938.214 kb on - strand at 2938.258 kb on - strand, within yeiP at 2938.261 kb on + strand, within yeiP at 2938.261 kb on + strand, within yeiP at 2938.488 kb on - strand, within yeiP at 2938.497 kb on - strand, within yeiP at 2938.498 kb on + strand, within yeiP at 2938.499 kb on - strand, within yeiP at 2938.499 kb on - strand, within yeiP at 2938.522 kb on + strand, within yeiP at 2938.522 kb on + strand, within yeiP at 2938.523 kb on - strand, within yeiP at 2938.523 kb on - strand, within yeiP at 2938.523 kb on - strand, within yeiP at 2938.541 kb on - strand, within yeiP at 2938.541 kb on - strand, within yeiP at 2938.907 kb on + strand at 2938.908 kb on - strand at 2938.920 kb on + strand at 2938.920 kb on + strand at 2938.920 kb on + strand at 2938.921 kb on - strand at 2939.090 kb on + strand, within yeiW at 2939.091 kb on - strand, within yeiW at 2939.116 kb on - strand, within yeiW at 2939.183 kb on + strand at 2939.193 kb on + strand at 2939.194 kb on - strand at 2939.318 kb on + strand, within setB at 2939.321 kb on - strand, within setB at 2939.369 kb on - strand, within setB at 2939.503 kb on - strand, within setB at 2939.534 kb on - strand, within setB at 2939.627 kb on + strand, within setB at 2939.627 kb on + strand, within setB at 2939.627 kb on + strand, within setB at 2939.628 kb on - strand, within setB at 2939.628 kb on - strand, within setB at 2939.628 kb on - strand, within setB at 2939.631 kb on + strand, within setB at 2939.650 kb on + strand, within setB at 2939.650 kb on + strand, within setB at 2939.651 kb on - strand, within setB at 2939.702 kb on + strand, within setB at 2939.827 kb on + strand, within setB at 2939.827 kb on + strand, within setB at 2939.828 kb on - strand, within setB at 2939.864 kb on - strand, within setB at 2939.864 kb on - strand, within setB at 2940.006 kb on - strand, within setB at 2940.009 kb on - strand, within setB at 2940.040 kb on + strand, within setB at 2940.040 kb on + strand, within setB at 2940.041 kb on - strand, within setB at 2940.041 kb on - strand, within setB at 2940.125 kb on + strand, within setB
Per-strain Table
Position Strand Gene LocusTag Fraction RB51 remove 2,937,933 + +0.3 2,937,933 + -0.6 2,937,934 - +1.3 2,938,212 - +0.1 2,938,212 - -0.0 2,938,214 - +0.7 2,938,214 - +0.5 2,938,258 - yeiP NOLOHH_14995 0.11 -0.0 2,938,261 + yeiP NOLOHH_14995 0.12 +1.2 2,938,261 + yeiP NOLOHH_14995 0.12 +0.5 2,938,488 - yeiP NOLOHH_14995 0.51 +0.2 2,938,497 - yeiP NOLOHH_14995 0.53 +0.6 2,938,498 + yeiP NOLOHH_14995 0.53 -0.5 2,938,499 - yeiP NOLOHH_14995 0.53 +0.7 2,938,499 - yeiP NOLOHH_14995 0.53 +0.8 2,938,522 + yeiP NOLOHH_14995 0.57 +0.4 2,938,522 + yeiP NOLOHH_14995 0.57 -0.1 2,938,523 - yeiP NOLOHH_14995 0.57 -1.1 2,938,523 - yeiP NOLOHH_14995 0.57 -0.8 2,938,523 - yeiP NOLOHH_14995 0.57 +0.7 2,938,541 - yeiP NOLOHH_14995 0.61 +0.2 2,938,541 - yeiP NOLOHH_14995 0.61 -0.7 2,938,907 + -0.8 2,938,908 - +0.9 2,938,920 + -1.2 2,938,920 + -0.9 2,938,920 + -0.7 2,938,921 - -1.7 2,939,090 + yeiW NOLOHH_15000 0.66 +0.2 2,939,091 - yeiW NOLOHH_15000 0.67 -1.2 2,939,116 - yeiW NOLOHH_15000 0.76 -1.2 2,939,183 + +0.2 2,939,193 + -0.6 2,939,194 - +1.1 2,939,318 + setB NOLOHH_15005 0.12 +1.7 2,939,321 - setB NOLOHH_15005 0.13 -1.3 2,939,369 - setB NOLOHH_15005 0.17 +0.1 2,939,503 - setB NOLOHH_15005 0.28 +0.2 2,939,534 - setB NOLOHH_15005 0.31 +1.1 2,939,627 + setB NOLOHH_15005 0.38 +0.3 2,939,627 + setB NOLOHH_15005 0.38 +0.6 2,939,627 + setB NOLOHH_15005 0.38 +0.5 2,939,628 - setB NOLOHH_15005 0.39 -0.5 2,939,628 - setB NOLOHH_15005 0.39 -0.5 2,939,628 - setB NOLOHH_15005 0.39 -0.0 2,939,631 + setB NOLOHH_15005 0.39 +1.5 2,939,650 + setB NOLOHH_15005 0.40 -0.4 2,939,650 + setB NOLOHH_15005 0.40 +0.1 2,939,651 - setB NOLOHH_15005 0.41 +1.9 2,939,702 + setB NOLOHH_15005 0.45 -0.6 2,939,827 + setB NOLOHH_15005 0.55 +0.1 2,939,827 + setB NOLOHH_15005 0.55 +0.1 2,939,828 - setB NOLOHH_15005 0.55 -0.6 2,939,864 - setB NOLOHH_15005 0.59 -1.8 2,939,864 - setB NOLOHH_15005 0.59 +0.3 2,940,006 - setB NOLOHH_15005 0.71 +0.7 2,940,009 - setB NOLOHH_15005 0.71 +1.2 2,940,040 + setB NOLOHH_15005 0.73 +0.4 2,940,040 + setB NOLOHH_15005 0.73 +1.0 2,940,041 - setB NOLOHH_15005 0.74 +0.5 2,940,041 - setB NOLOHH_15005 0.74 -0.5 2,940,125 + setB NOLOHH_15005 0.81 -0.4
Or see this region's nucleotide sequence