Experiment: RB51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_11760 and NOLOHH_11765 are separated by 193 nucleotides NOLOHH_11765 and yqeL are separated by 256 nucleotides yqeL and yqeJ are separated by 32 nucleotides yqeJ and yqeI overlap by 8 nucleotides
NOLOHH_11760: NOLOHH_11760 - Putative uncharacterized protein YgeF, at 2,276,323 to 2,276,760
_11760
NOLOHH_11765: NOLOHH_11765 - hypothetical protein, at 2,276,954 to 2,277,097
_11765
NOLOHH_11770: yqeL - Uncharacterized protein YqeL, at 2,277,354 to 2,277,494
yqeL
NOLOHH_11775: yqeJ - Uncharacterized protein YqeJ, at 2,277,527 to 2,278,009
yqeJ
NOLOHH_11780: yqeI - Uncharacterized protein YqeI, at 2,278,002 to 2,278,811
yqeI
Position (kb) 2277
2278 Strain fitness (log2 ratio) -2
-1
0
1 at 2276.717 kb on - strand at 2277.456 kb on - strand, within yqeL at 2277.770 kb on - strand, within yqeJ at 2278.342 kb on - strand, within yqeI at 2278.419 kb on - strand, within yqeI at 2278.448 kb on + strand, within yqeI at 2278.473 kb on + strand, within yqeI at 2278.491 kb on - strand, within yqeI
Per-strain Table
Position Strand Gene LocusTag Fraction RB51 remove 2,276,717 - -0.0 2,277,456 - yqeL NOLOHH_11770 0.72 -1.4 2,277,770 - yqeJ NOLOHH_11775 0.50 -0.6 2,278,342 - yqeI NOLOHH_11780 0.42 +0.9 2,278,419 - yqeI NOLOHH_11780 0.51 -2.3 2,278,448 + yqeI NOLOHH_11780 0.55 -1.4 2,278,473 + yqeI NOLOHH_11780 0.58 -1.4 2,278,491 - yqeI NOLOHH_11780 0.60 +0.2
Or see this region's nucleotide sequence