Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS16145

Experiment: Xylan from corn core; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core; autoclaved 2.5 mg/ml (C)
4,132,664	+		ABI39_RS16135	0.47	+0.7
4,132,938	-		ABI39_RS16135	0.72	+1.2
4,132,938	-		ABI39_RS16135	0.72	+0.3
4,132,939	+		ABI39_RS16135	0.72	-0.2
4,132,939	+		ABI39_RS16135	0.72	+0.4
4,132,949	+		ABI39_RS16135	0.73	-0.3
4,132,949	+		ABI39_RS16135	0.73	-0.1
4,133,149	+				-0.1
4,133,149	+				-1.1
4,133,156	-				+1.8
4,133,174	+				+0.7
4,133,291	-				+0.7
4,133,298	+				-0.1
4,133,299	-				+1.3
4,133,301	+				-0.9
4,133,349	-				+0.8
4,133,353	+				-0.6
4,133,353	+				-0.3
4,133,354	-				+0.9
4,133,474	-				-0.8
4,133,487	-				+1.4
4,133,498	+				+0.5
4,133,499	-				-0.8
4,133,507	+				+0.2
4,133,508	-				+0.1
4,133,509	+				-0.5
4,133,510	-				+1.4
4,133,510	-				+0.7
4,133,660	+				+0.0
4,133,660	+				-1.2
4,133,664	+				+0.4
4,133,668	-				+1.7
4,133,670	+				+0.5
4,133,673	+				+1.0
4,133,696	-		ABI39_RS16145	0.14	+1.5
4,133,752	-		ABI39_RS16145	0.29	+1.3
4,133,896	-		ABI39_RS16145	0.68	+1.3
4,133,988	-				+1.9
4,134,035	+				+0.2
4,134,071	+				-0.6
4,134,072	-				+2.6
4,134,072	-				+0.5
4,134,073	+				-1.1
4,134,093	+				-0.3
4,134,135	-		ABI39_RS16150	0.10	+1.2
4,134,190	+		ABI39_RS16150	0.20	-0.0
4,134,190	+		ABI39_RS16150	0.20	+0.1
4,134,190	+		ABI39_RS16150	0.20	-0.2
4,134,191	-		ABI39_RS16150	0.20	+0.0
4,134,192	+		ABI39_RS16150	0.20	+0.1
4,134,217	-		ABI39_RS16150	0.25	+2.2
4,134,238	+		ABI39_RS16150	0.28	+0.1
4,134,239	-		ABI39_RS16150	0.29	+1.2
4,134,240	+		ABI39_RS16150	0.29	-0.6
4,134,240	+		ABI39_RS16150	0.29	-0.2
4,134,240	+		ABI39_RS16150	0.29	-0.6
4,134,316	-		ABI39_RS16150	0.42	+1.7
4,134,341	+		ABI39_RS16150	0.47	-0.6
4,134,378	-		ABI39_RS16150	0.54	+0.9
4,134,410	+		ABI39_RS16150	0.59	+0.5
4,134,422	+		ABI39_RS16150	0.61	-0.4
4,134,522	+		ABI39_RS16150	0.79	-0.0
4,134,543	+		ABI39_RS16150	0.83	+0.2
4,134,544	-		ABI39_RS16150	0.83	+0.3
4,134,544	-		ABI39_RS16150	0.83	+1.5
4,134,571	+		ABI39_RS16150	0.88	+0.5
4,134,573	+		ABI39_RS16150	0.89	+0.1
4,134,612	+				+0.6
4,134,613	-				-0.2
4,134,690	-				+2.0
4,134,737	+				-0.8
4,134,737	+				-1.0
4,134,742	-				+2.0
4,134,759	+		ABI39_RS16155	0.13	+0.3
4,134,760	-		ABI39_RS16155	0.13	+0.6
4,134,762	-		ABI39_RS16155	0.14	+1.6
4,134,816	+		ABI39_RS16155	0.24	-0.7
4,134,816	+		ABI39_RS16155	0.24	-0.3
4,134,837	-		ABI39_RS16155	0.28	+2.2
4,134,838	+		ABI39_RS16155	0.28	+0.5
4,134,839	-		ABI39_RS16155	0.28	+1.7
4,134,930	-		ABI39_RS16155	0.45	+1.2
4,134,932	-		ABI39_RS16155	0.46	+1.8
4,134,949	+		ABI39_RS16155	0.49	+0.1
4,134,950	-		ABI39_RS16155	0.49	+0.1
4,134,973	+		ABI39_RS16155	0.53	+1.2