Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12620

Experiment: Bas68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas68
2,449,325	-	emrB	NOLOHH_12615	0.45	-0.5
2,449,325	-	emrB	NOLOHH_12615	0.45	+0.1
2,449,331	+	emrB	NOLOHH_12615	0.45	+0.6
2,449,332	-	emrB	NOLOHH_12615	0.45	+0.5
2,449,333	+	emrB	NOLOHH_12615	0.45	-0.3
2,449,333	+	emrB	NOLOHH_12615	0.45	-0.0
2,449,334	-	emrB	NOLOHH_12615	0.45	+0.6
2,449,334	-	emrB	NOLOHH_12615	0.45	+1.2
2,449,334	-	emrB	NOLOHH_12615	0.45	-0.2
2,449,334	-	emrB	NOLOHH_12615	0.45	+0.9
2,449,334	-	emrB	NOLOHH_12615	0.45	-0.2
2,449,464	-	emrB	NOLOHH_12615	0.54	-0.1
2,449,520	+	emrB	NOLOHH_12615	0.57	+0.6
2,449,788	-	emrB	NOLOHH_12615	0.75	-0.1
2,449,788	-	emrB	NOLOHH_12615	0.75	+0.6
2,450,075	+				+0.1
2,450,076	-				+0.5
2,450,267	-				+0.4
2,450,292	+				-0.8
2,450,292	+				-0.4
2,450,293	-				+0.6
2,450,293	-				+1.2
2,450,302	+				+2.3
2,450,511	-	emrA	NOLOHH_12620	0.27	-0.8
2,450,568	+	emrA	NOLOHH_12620	0.32	-0.3
2,450,589	+	emrA	NOLOHH_12620	0.34	-0.2
2,450,590	-	emrA	NOLOHH_12620	0.34	+0.0
2,450,590	-	emrA	NOLOHH_12620	0.34	+0.6
2,450,610	+	emrA	NOLOHH_12620	0.36	+0.5
2,450,611	-	emrA	NOLOHH_12620	0.36	-0.1
2,450,611	-	emrA	NOLOHH_12620	0.36	-0.3
2,450,611	-	emrA	NOLOHH_12620	0.36	+0.9
2,450,611	-	emrA	NOLOHH_12620	0.36	-0.4
2,450,611	-	emrA	NOLOHH_12620	0.36	+0.6
2,450,653	-	emrA	NOLOHH_12620	0.39	+1.2
2,450,690	+	emrA	NOLOHH_12620	0.43	-0.7
2,450,747	-	emrA	NOLOHH_12620	0.47	+0.4
2,450,747	-	emrA	NOLOHH_12620	0.47	+0.1
2,450,791	-	emrA	NOLOHH_12620	0.51	+0.9
2,450,791	-	emrA	NOLOHH_12620	0.51	+0.7
2,450,822	+	emrA	NOLOHH_12620	0.54	+1.0
2,450,823	-	emrA	NOLOHH_12620	0.54	-1.3
2,450,823	-	emrA	NOLOHH_12620	0.54	+0.5
2,450,823	-	emrA	NOLOHH_12620	0.54	+0.0
2,450,823	-	emrA	NOLOHH_12620	0.54	+0.2
2,450,823	-	emrA	NOLOHH_12620	0.54	+0.1
2,450,937	-	emrA	NOLOHH_12620	0.64	+1.1
2,451,004	-	emrA	NOLOHH_12620	0.69	-0.0
2,451,172	-	emrA	NOLOHH_12620	0.84	+0.6
2,451,172	-	emrA	NOLOHH_12620	0.84	+1.1
2,451,264	+				-1.5
2,451,269	-				+0.1
2,451,303	+				-0.9
2,451,363	+				+0.7
2,451,364	-				+0.0
2,451,384	+				+0.6
2,451,385	-				+2.5
2,451,459	-				-1.0
2,451,461	-				-1.2
2,451,461	-				-2.1
2,451,461	-				-1.8
2,451,622	-	emrR	NOLOHH_12625	0.25	-3.2
2,451,622	-	emrR	NOLOHH_12625	0.25	-1.3
2,451,791	-	emrR	NOLOHH_12625	0.57	-3.8
2,451,791	-	emrR	NOLOHH_12625	0.57	-3.5
2,451,791	-	emrR	NOLOHH_12625	0.57	-3.6
2,451,808	-	emrR	NOLOHH_12625	0.60	-1.1
2,451,986	-				-3.9
2,452,015	-				-2.9
2,452,077	-				-1.1
2,452,077	-				-1.1
2,452,082	+				-4.0
2,452,083	-				-0.2
2,452,083	-				-1.8
2,452,083	-				-2.1
2,452,083	-				-0.7
2,452,112	+				-4.8
2,452,114	+				-1.0
2,452,114	+				-2.6
2,452,115	-				+0.5
2,452,115	-				-0.1
2,452,115	-				-0.3
2,452,115	-				+0.4
2,452,116	+				-3.7
2,452,116	+				-2.6
2,452,117	-				-0.5
2,452,117	-				+0.1
2,452,146	-	ygaH	NOLOHH_12630	0.10	-0.4
2,452,176	+	ygaH	NOLOHH_12630	0.19	-2.3
2,452,191	+	ygaH	NOLOHH_12630	0.24	-1.4
2,452,191	+	ygaH	NOLOHH_12630	0.24	-3.0
2,452,248	+	ygaH	NOLOHH_12630	0.41	-2.7
2,452,249	-	ygaH	NOLOHH_12630	0.41	-1.5
2,452,327	-	ygaH	NOLOHH_12630	0.64	-1.4