Experiment: Bas10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nuoL and nuoM are separated by 163 nucleotides nuoM and nuoN are separated by 6 nucleotides
NOLOHH_14510: nuoL - NADH-quinone oxidoreductase subunit L, at 2,826,958 to 2,828,799
nuoL
NOLOHH_14515: nuoM - NADH-quinone oxidoreductase subunit M, at 2,828,963 to 2,830,492
nuoM
NOLOHH_14520: nuoN - NADH-quinone oxidoreductase subunit NuoN, at 2,830,499 to 2,831,956
nuoN
Position (kb)
2828
2829
2830
2831 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2828.084 kb on - strand, within nuoL at 2828.084 kb on - strand, within nuoL at 2828.152 kb on - strand, within nuoL at 2828.505 kb on + strand, within nuoL at 2828.505 kb on + strand, within nuoL at 2828.506 kb on - strand, within nuoL at 2828.564 kb on - strand, within nuoL at 2828.711 kb on + strand at 2828.737 kb on + strand at 2828.789 kb on + strand at 2828.789 kb on + strand at 2828.829 kb on + strand at 2828.829 kb on + strand at 2828.829 kb on + strand at 2828.829 kb on + strand at 2828.829 kb on + strand at 2828.830 kb on - strand at 2828.831 kb on + strand at 2828.831 kb on + strand at 2828.831 kb on + strand at 2828.831 kb on + strand at 2828.831 kb on + strand at 2828.831 kb on + strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.832 kb on - strand at 2828.839 kb on + strand at 2828.943 kb on + strand at 2828.944 kb on - strand at 2828.985 kb on + strand at 2829.116 kb on + strand, within nuoM at 2829.197 kb on - strand, within nuoM at 2829.270 kb on + strand, within nuoM at 2829.270 kb on + strand, within nuoM at 2829.270 kb on + strand, within nuoM at 2829.271 kb on - strand, within nuoM at 2829.271 kb on - strand, within nuoM at 2829.271 kb on - strand, within nuoM at 2829.413 kb on + strand, within nuoM at 2829.491 kb on + strand, within nuoM at 2829.551 kb on + strand, within nuoM at 2829.552 kb on - strand, within nuoM at 2829.624 kb on - strand, within nuoM at 2829.832 kb on + strand, within nuoM at 2829.832 kb on + strand, within nuoM at 2829.833 kb on - strand, within nuoM at 2829.833 kb on - strand, within nuoM at 2829.860 kb on + strand, within nuoM at 2829.912 kb on - strand, within nuoM at 2829.950 kb on - strand, within nuoM at 2830.030 kb on + strand, within nuoM at 2830.186 kb on + strand, within nuoM at 2830.186 kb on + strand, within nuoM at 2830.361 kb on - strand at 2830.403 kb on + strand at 2830.465 kb on + strand at 2830.477 kb on + strand at 2830.478 kb on - strand at 2830.478 kb on - strand at 2830.480 kb on + strand at 2830.480 kb on + strand at 2830.480 kb on + strand at 2830.481 kb on - strand at 2830.490 kb on + strand at 2830.724 kb on + strand, within nuoN at 2830.724 kb on + strand, within nuoN at 2830.791 kb on - strand, within nuoN at 2830.815 kb on - strand, within nuoN at 2830.827 kb on + strand, within nuoN at 2830.827 kb on + strand, within nuoN at 2830.973 kb on + strand, within nuoN at 2831.030 kb on + strand, within nuoN at 2831.030 kb on + strand, within nuoN at 2831.031 kb on - strand, within nuoN at 2831.187 kb on + strand, within nuoN at 2831.187 kb on + strand, within nuoN at 2831.187 kb on + strand, within nuoN at 2831.313 kb on + strand, within nuoN at 2831.313 kb on + strand, within nuoN at 2831.314 kb on - strand, within nuoN at 2831.404 kb on + strand, within nuoN at 2831.484 kb on - strand, within nuoN
Per-strain Table
Position Strand Gene LocusTag Fraction Bas10 remove 2,828,084 - nuoL NOLOHH_14510 0.61 +1.4 2,828,084 - nuoL NOLOHH_14510 0.61 -3.8 2,828,152 - nuoL NOLOHH_14510 0.65 -1.5 2,828,505 + nuoL NOLOHH_14510 0.84 +1.8 2,828,505 + nuoL NOLOHH_14510 0.84 -1.1 2,828,506 - nuoL NOLOHH_14510 0.84 -1.6 2,828,564 - nuoL NOLOHH_14510 0.87 -1.7 2,828,711 + +0.0 2,828,737 + -0.2 2,828,789 + -1.2 2,828,789 + -1.0 2,828,829 + -4.1 2,828,829 + -1.1 2,828,829 + +0.5 2,828,829 + -0.2 2,828,829 + -2.6 2,828,830 - -0.5 2,828,831 + -2.1 2,828,831 + -2.7 2,828,831 + -0.3 2,828,831 + +0.2 2,828,831 + -1.1 2,828,831 + -0.5 2,828,832 - -0.5 2,828,832 - -0.6 2,828,832 - -0.8 2,828,832 - -1.1 2,828,832 - -0.2 2,828,832 - -0.3 2,828,832 - -2.3 2,828,832 - -1.5 2,828,839 + -0.3 2,828,943 + -1.4 2,828,944 - -1.2 2,828,985 + -1.5 2,829,116 + nuoM NOLOHH_14515 0.10 -2.4 2,829,197 - nuoM NOLOHH_14515 0.15 -2.9 2,829,270 + nuoM NOLOHH_14515 0.20 -0.5 2,829,270 + nuoM NOLOHH_14515 0.20 -0.5 2,829,270 + nuoM NOLOHH_14515 0.20 -1.1 2,829,271 - nuoM NOLOHH_14515 0.20 -1.7 2,829,271 - nuoM NOLOHH_14515 0.20 +0.4 2,829,271 - nuoM NOLOHH_14515 0.20 +1.7 2,829,413 + nuoM NOLOHH_14515 0.29 -2.3 2,829,491 + nuoM NOLOHH_14515 0.35 -1.2 2,829,551 + nuoM NOLOHH_14515 0.38 -3.3 2,829,552 - nuoM NOLOHH_14515 0.38 -1.0 2,829,624 - nuoM NOLOHH_14515 0.43 -0.8 2,829,832 + nuoM NOLOHH_14515 0.57 -0.3 2,829,832 + nuoM NOLOHH_14515 0.57 -1.8 2,829,833 - nuoM NOLOHH_14515 0.57 -0.8 2,829,833 - nuoM NOLOHH_14515 0.57 -2.1 2,829,860 + nuoM NOLOHH_14515 0.59 +0.2 2,829,912 - nuoM NOLOHH_14515 0.62 -1.2 2,829,950 - nuoM NOLOHH_14515 0.65 -2.3 2,830,030 + nuoM NOLOHH_14515 0.70 -1.2 2,830,186 + nuoM NOLOHH_14515 0.80 -0.4 2,830,186 + nuoM NOLOHH_14515 0.80 -0.6 2,830,361 - +0.4 2,830,403 + -2.2 2,830,465 + -0.7 2,830,477 + -0.5 2,830,478 - -1.0 2,830,478 - +0.0 2,830,480 + -2.3 2,830,480 + -1.5 2,830,480 + -1.0 2,830,481 - -2.5 2,830,490 + -1.4 2,830,724 + nuoN NOLOHH_14520 0.15 -2.2 2,830,724 + nuoN NOLOHH_14520 0.15 -2.9 2,830,791 - nuoN NOLOHH_14520 0.20 -0.8 2,830,815 - nuoN NOLOHH_14520 0.22 -0.2 2,830,827 + nuoN NOLOHH_14520 0.22 -0.6 2,830,827 + nuoN NOLOHH_14520 0.22 +0.3 2,830,973 + nuoN NOLOHH_14520 0.33 -2.5 2,831,030 + nuoN NOLOHH_14520 0.36 -1.2 2,831,030 + nuoN NOLOHH_14520 0.36 -1.7 2,831,031 - nuoN NOLOHH_14520 0.36 +0.8 2,831,187 + nuoN NOLOHH_14520 0.47 -1.7 2,831,187 + nuoN NOLOHH_14520 0.47 +0.3 2,831,187 + nuoN NOLOHH_14520 0.47 -2.2 2,831,313 + nuoN NOLOHH_14520 0.56 -1.0 2,831,313 + nuoN NOLOHH_14520 0.56 -0.3 2,831,314 - nuoN NOLOHH_14520 0.56 +0.7 2,831,404 + nuoN NOLOHH_14520 0.62 -3.3 2,831,484 - nuoN NOLOHH_14520 0.68 -0.2
Or see this region's nucleotide sequence