Experiment: Bas10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mpl and fbp are separated by 175 nucleotides fbp and yjfF are separated by 32 nucleotides
NOLOHH_04200: mpl - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase, at 761,227 to 762,600
mpl
NOLOHH_04205: fbp - class 1 fructose-bisphosphatase, at 762,776 to 763,774
fbp
NOLOHH_04210: yjfF - sugar ABC transporter permease YjfF, at 763,807 to 764,802
yjfF
Position (kb) 762
763
764 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 761.949 kb on + strand, within mpl at 761.949 kb on + strand, within mpl at 761.950 kb on - strand, within mpl at 761.950 kb on - strand, within mpl at 761.953 kb on - strand, within mpl at 762.063 kb on + strand, within mpl at 762.074 kb on + strand, within mpl at 762.087 kb on + strand, within mpl at 762.088 kb on - strand, within mpl at 762.116 kb on + strand, within mpl at 762.117 kb on - strand, within mpl at 762.117 kb on - strand, within mpl at 762.117 kb on - strand, within mpl at 762.255 kb on + strand, within mpl at 762.256 kb on - strand, within mpl at 762.336 kb on + strand, within mpl at 762.336 kb on + strand, within mpl at 762.336 kb on + strand, within mpl at 762.336 kb on + strand, within mpl at 762.337 kb on - strand, within mpl at 762.337 kb on - strand, within mpl at 762.337 kb on - strand, within mpl at 762.337 kb on - strand, within mpl at 762.337 kb on - strand, within mpl at 762.338 kb on + strand, within mpl at 762.338 kb on + strand, within mpl at 762.339 kb on - strand, within mpl at 762.339 kb on - strand, within mpl at 762.339 kb on - strand, within mpl at 762.443 kb on + strand, within mpl at 762.478 kb on + strand at 762.479 kb on - strand at 762.479 kb on - strand at 762.479 kb on - strand at 762.479 kb on - strand at 762.497 kb on + strand at 762.521 kb on - strand at 762.533 kb on - strand at 762.588 kb on + strand at 762.588 kb on + strand at 762.589 kb on - strand at 762.589 kb on - strand at 762.589 kb on - strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.600 kb on + strand at 762.601 kb on - strand at 762.601 kb on - strand at 762.601 kb on - strand at 762.601 kb on - strand at 762.601 kb on - strand at 762.601 kb on - strand at 762.601 kb on - strand at 762.609 kb on - strand at 762.641 kb on + strand at 762.641 kb on + strand at 762.641 kb on + strand at 762.642 kb on - strand at 762.642 kb on - strand at 762.642 kb on - strand at 762.720 kb on + strand at 762.720 kb on + strand at 762.721 kb on - strand at 762.755 kb on - strand at 762.776 kb on - strand at 762.796 kb on + strand at 762.861 kb on + strand at 762.862 kb on - strand at 763.089 kb on - strand, within fbp at 763.135 kb on + strand, within fbp at 763.178 kb on - strand, within fbp at 763.178 kb on - strand, within fbp at 763.178 kb on - strand, within fbp at 763.255 kb on - strand, within fbp at 763.256 kb on + strand, within fbp at 763.257 kb on - strand, within fbp at 763.257 kb on - strand, within fbp at 763.267 kb on + strand, within fbp at 763.267 kb on + strand, within fbp at 763.280 kb on + strand, within fbp at 763.309 kb on + strand, within fbp at 763.309 kb on + strand, within fbp at 763.309 kb on + strand, within fbp at 763.310 kb on - strand, within fbp at 763.310 kb on - strand, within fbp at 763.313 kb on + strand, within fbp at 763.313 kb on + strand, within fbp at 763.314 kb on - strand, within fbp at 763.403 kb on + strand, within fbp at 763.403 kb on + strand, within fbp at 763.404 kb on - strand, within fbp at 763.409 kb on - strand, within fbp at 763.433 kb on + strand, within fbp at 763.433 kb on + strand, within fbp at 763.434 kb on - strand, within fbp at 763.438 kb on + strand, within fbp at 763.438 kb on + strand, within fbp at 763.438 kb on + strand, within fbp at 763.439 kb on - strand, within fbp at 763.439 kb on - strand, within fbp at 763.460 kb on - strand, within fbp at 763.490 kb on + strand, within fbp at 763.491 kb on - strand, within fbp at 763.491 kb on - strand, within fbp at 763.491 kb on - strand, within fbp at 763.492 kb on + strand, within fbp at 763.544 kb on + strand, within fbp at 763.544 kb on + strand, within fbp at 763.544 kb on + strand, within fbp at 763.595 kb on + strand, within fbp at 763.595 kb on + strand, within fbp at 763.663 kb on + strand, within fbp at 763.664 kb on - strand, within fbp at 763.726 kb on + strand at 763.727 kb on - strand at 763.808 kb on + strand at 763.957 kb on + strand, within yjfF at 763.957 kb on + strand, within yjfF at 763.958 kb on - strand, within yjfF at 763.961 kb on + strand, within yjfF at 763.961 kb on + strand, within yjfF at 763.961 kb on + strand, within yjfF at 763.962 kb on - strand, within yjfF at 763.962 kb on - strand, within yjfF at 764.006 kb on - strand, within yjfF at 764.006 kb on - strand, within yjfF at 764.008 kb on + strand, within yjfF at 764.009 kb on - strand, within yjfF at 764.081 kb on - strand, within yjfF at 764.081 kb on - strand, within yjfF at 764.110 kb on - strand, within yjfF at 764.111 kb on + strand, within yjfF at 764.112 kb on - strand, within yjfF at 764.112 kb on - strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.160 kb on + strand, within yjfF at 764.161 kb on - strand, within yjfF at 764.161 kb on - strand, within yjfF at 764.161 kb on - strand, within yjfF at 764.161 kb on - strand, within yjfF at 764.161 kb on - strand, within yjfF at 764.161 kb on - strand, within yjfF at 764.162 kb on + strand, within yjfF at 764.162 kb on + strand, within yjfF at 764.162 kb on + strand, within yjfF at 764.162 kb on + strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.163 kb on - strand, within yjfF at 764.235 kb on - strand, within yjfF at 764.236 kb on + strand, within yjfF at 764.236 kb on + strand, within yjfF at 764.236 kb on + strand, within yjfF at 764.237 kb on - strand, within yjfF at 764.272 kb on + strand, within yjfF at 764.273 kb on - strand, within yjfF at 764.273 kb on - strand, within yjfF at 764.317 kb on + strand, within yjfF at 764.318 kb on - strand, within yjfF at 764.366 kb on + strand, within yjfF at 764.367 kb on - strand, within yjfF at 764.408 kb on + strand, within yjfF at 764.409 kb on - strand, within yjfF at 764.409 kb on - strand, within yjfF at 764.445 kb on + strand, within yjfF at 764.446 kb on - strand, within yjfF at 764.491 kb on - strand, within yjfF at 764.516 kb on - strand, within yjfF at 764.650 kb on - strand, within yjfF at 764.748 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas10 remove 761,949 + mpl NOLOHH_04200 0.53 -1.2 761,949 + mpl NOLOHH_04200 0.53 +1.7 761,950 - mpl NOLOHH_04200 0.53 +0.6 761,950 - mpl NOLOHH_04200 0.53 -0.5 761,953 - mpl NOLOHH_04200 0.53 +0.6 762,063 + mpl NOLOHH_04200 0.61 +0.6 762,074 + mpl NOLOHH_04200 0.62 +0.5 762,087 + mpl NOLOHH_04200 0.63 +0.5 762,088 - mpl NOLOHH_04200 0.63 +0.7 762,116 + mpl NOLOHH_04200 0.65 +0.2 762,117 - mpl NOLOHH_04200 0.65 -0.1 762,117 - mpl NOLOHH_04200 0.65 -0.2 762,117 - mpl NOLOHH_04200 0.65 +1.2 762,255 + mpl NOLOHH_04200 0.75 +1.1 762,256 - mpl NOLOHH_04200 0.75 +0.6 762,336 + mpl NOLOHH_04200 0.81 +0.9 762,336 + mpl NOLOHH_04200 0.81 +0.6 762,336 + mpl NOLOHH_04200 0.81 -2.4 762,336 + mpl NOLOHH_04200 0.81 +0.2 762,337 - mpl NOLOHH_04200 0.81 -0.1 762,337 - mpl NOLOHH_04200 0.81 -2.1 762,337 - mpl NOLOHH_04200 0.81 +0.1 762,337 - mpl NOLOHH_04200 0.81 -0.4 762,337 - mpl NOLOHH_04200 0.81 +0.6 762,338 + mpl NOLOHH_04200 0.81 +0.4 762,338 + mpl NOLOHH_04200 0.81 -0.3 762,339 - mpl NOLOHH_04200 0.81 -0.5 762,339 - mpl NOLOHH_04200 0.81 +0.2 762,339 - mpl NOLOHH_04200 0.81 -0.2 762,443 + mpl NOLOHH_04200 0.89 +0.7 762,478 + +0.5 762,479 - +1.1 762,479 - +0.7 762,479 - +0.7 762,479 - +0.4 762,497 + +0.2 762,521 - +1.0 762,533 - +0.1 762,588 + -0.2 762,588 + +0.9 762,589 - +0.5 762,589 - -0.5 762,589 - +0.4 762,600 + -0.7 762,600 + +0.2 762,600 + -0.5 762,600 + +0.4 762,600 + -0.3 762,600 + +0.2 762,600 + -0.9 762,600 + -0.0 762,601 - +0.2 762,601 - +0.5 762,601 - +0.6 762,601 - -0.3 762,601 - +0.4 762,601 - +0.5 762,601 - -0.4 762,609 - +0.1 762,641 + -1.1 762,641 + +0.7 762,641 + -0.4 762,642 - -0.6 762,642 - -0.2 762,642 - +0.5 762,720 + -1.3 762,720 + +0.1 762,721 - -0.0 762,755 - -0.6 762,776 - -1.8 762,796 + -1.0 762,861 + -0.7 762,862 - -0.1 763,089 - fbp NOLOHH_04205 0.31 -2.6 763,135 + fbp NOLOHH_04205 0.36 -0.7 763,178 - fbp NOLOHH_04205 0.40 -4.5 763,178 - fbp NOLOHH_04205 0.40 -0.6 763,178 - fbp NOLOHH_04205 0.40 -2.3 763,255 - fbp NOLOHH_04205 0.48 +0.4 763,256 + fbp NOLOHH_04205 0.48 -0.8 763,257 - fbp NOLOHH_04205 0.48 -3.0 763,257 - fbp NOLOHH_04205 0.48 +1.2 763,267 + fbp NOLOHH_04205 0.49 -0.8 763,267 + fbp NOLOHH_04205 0.49 +0.1 763,280 + fbp NOLOHH_04205 0.50 +0.0 763,309 + fbp NOLOHH_04205 0.53 -1.9 763,309 + fbp NOLOHH_04205 0.53 -2.3 763,309 + fbp NOLOHH_04205 0.53 -1.7 763,310 - fbp NOLOHH_04205 0.53 -2.5 763,310 - fbp NOLOHH_04205 0.53 -0.1 763,313 + fbp NOLOHH_04205 0.54 -0.6 763,313 + fbp NOLOHH_04205 0.54 -0.6 763,314 - fbp NOLOHH_04205 0.54 -2.2 763,403 + fbp NOLOHH_04205 0.63 -1.1 763,403 + fbp NOLOHH_04205 0.63 -1.8 763,404 - fbp NOLOHH_04205 0.63 -1.2 763,409 - fbp NOLOHH_04205 0.63 -1.6 763,433 + fbp NOLOHH_04205 0.66 -2.6 763,433 + fbp NOLOHH_04205 0.66 -1.2 763,434 - fbp NOLOHH_04205 0.66 -0.7 763,438 + fbp NOLOHH_04205 0.66 -1.5 763,438 + fbp NOLOHH_04205 0.66 +0.4 763,438 + fbp NOLOHH_04205 0.66 -0.6 763,439 - fbp NOLOHH_04205 0.66 -0.5 763,439 - fbp NOLOHH_04205 0.66 -0.9 763,460 - fbp NOLOHH_04205 0.68 +0.5 763,490 + fbp NOLOHH_04205 0.71 -2.3 763,491 - fbp NOLOHH_04205 0.72 -0.8 763,491 - fbp NOLOHH_04205 0.72 -0.6 763,491 - fbp NOLOHH_04205 0.72 -0.6 763,492 + fbp NOLOHH_04205 0.72 +0.3 763,544 + fbp NOLOHH_04205 0.77 -1.2 763,544 + fbp NOLOHH_04205 0.77 -2.4 763,544 + fbp NOLOHH_04205 0.77 -1.3 763,595 + fbp NOLOHH_04205 0.82 -1.3 763,595 + fbp NOLOHH_04205 0.82 -0.4 763,663 + fbp NOLOHH_04205 0.89 -0.5 763,664 - fbp NOLOHH_04205 0.89 -0.1 763,726 + -1.3 763,727 - -2.0 763,808 + +0.6 763,957 + yjfF NOLOHH_04210 0.15 +0.8 763,957 + yjfF NOLOHH_04210 0.15 +0.4 763,958 - yjfF NOLOHH_04210 0.15 +0.2 763,961 + yjfF NOLOHH_04210 0.15 -0.6 763,961 + yjfF NOLOHH_04210 0.15 -1.0 763,961 + yjfF NOLOHH_04210 0.15 -0.5 763,962 - yjfF NOLOHH_04210 0.16 +0.5 763,962 - yjfF NOLOHH_04210 0.16 +0.9 764,006 - yjfF NOLOHH_04210 0.20 -0.1 764,006 - yjfF NOLOHH_04210 0.20 +0.4 764,008 + yjfF NOLOHH_04210 0.20 +0.4 764,009 - yjfF NOLOHH_04210 0.20 +1.6 764,081 - yjfF NOLOHH_04210 0.28 -0.4 764,081 - yjfF NOLOHH_04210 0.28 +0.3 764,110 - yjfF NOLOHH_04210 0.30 -0.3 764,111 + yjfF NOLOHH_04210 0.31 -0.1 764,112 - yjfF NOLOHH_04210 0.31 +0.6 764,112 - yjfF NOLOHH_04210 0.31 -0.2 764,160 + yjfF NOLOHH_04210 0.35 +1.2 764,160 + yjfF NOLOHH_04210 0.35 +0.0 764,160 + yjfF NOLOHH_04210 0.35 -0.3 764,160 + yjfF NOLOHH_04210 0.35 -0.5 764,160 + yjfF NOLOHH_04210 0.35 +0.1 764,160 + yjfF NOLOHH_04210 0.35 +0.5 764,160 + yjfF NOLOHH_04210 0.35 -0.3 764,160 + yjfF NOLOHH_04210 0.35 +0.1 764,160 + yjfF NOLOHH_04210 0.35 +0.1 764,161 - yjfF NOLOHH_04210 0.36 +0.2 764,161 - yjfF NOLOHH_04210 0.36 -0.2 764,161 - yjfF NOLOHH_04210 0.36 +0.7 764,161 - yjfF NOLOHH_04210 0.36 -1.2 764,161 - yjfF NOLOHH_04210 0.36 +0.1 764,161 - yjfF NOLOHH_04210 0.36 -0.5 764,162 + yjfF NOLOHH_04210 0.36 -0.3 764,162 + yjfF NOLOHH_04210 0.36 +0.2 764,162 + yjfF NOLOHH_04210 0.36 -0.6 764,162 + yjfF NOLOHH_04210 0.36 +0.0 764,163 - yjfF NOLOHH_04210 0.36 +0.5 764,163 - yjfF NOLOHH_04210 0.36 -0.2 764,163 - yjfF NOLOHH_04210 0.36 -0.0 764,163 - yjfF NOLOHH_04210 0.36 -0.5 764,163 - yjfF NOLOHH_04210 0.36 +0.2 764,163 - yjfF NOLOHH_04210 0.36 -0.2 764,163 - yjfF NOLOHH_04210 0.36 -0.6 764,235 - yjfF NOLOHH_04210 0.43 +1.2 764,236 + yjfF NOLOHH_04210 0.43 +0.4 764,236 + yjfF NOLOHH_04210 0.43 +0.3 764,236 + yjfF NOLOHH_04210 0.43 -0.2 764,237 - yjfF NOLOHH_04210 0.43 +0.4 764,272 + yjfF NOLOHH_04210 0.47 +0.4 764,273 - yjfF NOLOHH_04210 0.47 +0.3 764,273 - yjfF NOLOHH_04210 0.47 +0.5 764,317 + yjfF NOLOHH_04210 0.51 -0.5 764,318 - yjfF NOLOHH_04210 0.51 +0.8 764,366 + yjfF NOLOHH_04210 0.56 +1.4 764,367 - yjfF NOLOHH_04210 0.56 -0.5 764,408 + yjfF NOLOHH_04210 0.60 +0.6 764,409 - yjfF NOLOHH_04210 0.60 -1.7 764,409 - yjfF NOLOHH_04210 0.60 +0.1 764,445 + yjfF NOLOHH_04210 0.64 -1.1 764,446 - yjfF NOLOHH_04210 0.64 -0.0 764,491 - yjfF NOLOHH_04210 0.69 -1.0 764,516 - yjfF NOLOHH_04210 0.71 +0.2 764,650 - yjfF NOLOHH_04210 0.85 +0.6 764,748 - -0.2
Or see this region's nucleotide sequence