Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17845

Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	B-glucan from yeast; autoclaved 2.5 mg/ml (C)
4,497,018	-		ABI39_RS17835	0.50	+1.1
4,497,030	+		ABI39_RS17835	0.51	+0.8
4,497,034	+		ABI39_RS17835	0.52	+1.0
4,497,062	-		ABI39_RS17835	0.56	+0.5
4,497,143	+		ABI39_RS17835	0.66	-0.2
4,497,182	+		ABI39_RS17835	0.72	-0.3
4,497,182	+		ABI39_RS17835	0.72	+0.4
4,497,183	-		ABI39_RS17835	0.72	-0.8
4,497,185	-		ABI39_RS17835	0.72	-1.2
4,497,193	+		ABI39_RS17835	0.73	-0.1
4,497,194	-		ABI39_RS17835	0.73	-0.4
4,497,197	+		ABI39_RS17835	0.74	-1.0
4,497,198	-		ABI39_RS17835	0.74	+0.7
4,497,287	+		ABI39_RS17835	0.86	-2.3
4,497,287	+		ABI39_RS17835	0.86	+2.5
4,497,396	-				-0.0
4,497,396	-				+0.2
4,497,398	-				+0.7
4,497,483	+				-0.4
4,497,486	-				-0.7
4,497,586	-				+1.4
4,497,615	-				-0.7
4,497,701	+				-0.0
4,497,770	+				-1.2
4,497,815	-				+0.5
4,498,012	-				-0.0
4,498,113	+		ABI39_RS17845	0.11	-0.1
4,498,117	+		ABI39_RS17845	0.11	-1.0
4,498,202	+		ABI39_RS17845	0.19	+0.2
4,498,211	-		ABI39_RS17845	0.20	+0.6
4,498,253	+		ABI39_RS17845	0.24	+0.5
4,498,280	+		ABI39_RS17845	0.26	-0.1
4,498,283	+		ABI39_RS17845	0.26	+0.1
4,498,416	-		ABI39_RS17845	0.38	-1.0
4,498,416	-		ABI39_RS17845	0.38	-1.1
4,498,442	+		ABI39_RS17845	0.41	-1.1
4,498,442	+		ABI39_RS17845	0.41	+1.0
4,498,531	+		ABI39_RS17845	0.49	-0.1
4,498,534	-		ABI39_RS17845	0.49	-0.6
4,498,548	+		ABI39_RS17845	0.51	+0.9
4,498,613	+		ABI39_RS17845	0.57	+0.2
4,498,614	-		ABI39_RS17845	0.57	-0.1
4,498,681	-		ABI39_RS17845	0.63	-0.9
4,498,748	+		ABI39_RS17845	0.69	+0.5
4,498,825	-		ABI39_RS17845	0.76	+0.5
4,498,858	+		ABI39_RS17845	0.79	-2.3
4,499,003	-				+0.2
4,499,225	+				-1.2
4,499,228	+				+0.2
4,499,228	+				-0.7
4,499,228	+				+0.7
4,499,235	-				-1.1
4,499,311	+				-2.5
4,499,311	+				-2.2
4,499,396	-				-1.7
4,499,452	+				-0.6
4,499,503	+				+0.0
4,499,579	+				-0.3
4,499,586	+				+0.4
4,499,591	-		ABI39_RS17850	0.10	-1.2
4,499,591	-		ABI39_RS17850	0.10	-0.3
4,499,777	-		ABI39_RS17850	0.17	-0.3
4,499,785	-		ABI39_RS17850	0.18	-0.6
4,499,785	-		ABI39_RS17850	0.18	+0.4
4,499,793	-		ABI39_RS17850	0.18	-0.3
4,499,809	+		ABI39_RS17850	0.19	-1.7
4,499,833	+		ABI39_RS17850	0.20	+1.0
4,499,846	-		ABI39_RS17850	0.20	-1.3
4,499,881	+		ABI39_RS17850	0.21	+1.0
4,499,926	-		ABI39_RS17850	0.23	-1.9
4,499,926	-		ABI39_RS17850	0.23	-0.8
4,499,974	+		ABI39_RS17850	0.25	-0.3