Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12605

Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	B-glucan from yeast; autoclaved 2.5 mg/ml (C)
3,308,188	+		ABI39_RS12600	0.75	-1.6
3,308,325	-		ABI39_RS12600	0.80	-1.3
3,308,456	+		ABI39_RS12600	0.84	+0.3
3,308,456	+		ABI39_RS12600	0.84	+0.5
3,308,535	-		ABI39_RS12600	0.87	-0.8
3,308,593	+		ABI39_RS12600	0.89	+0.3
3,308,600	-		ABI39_RS12600	0.90	+0.2
3,308,628	-				+0.2
3,308,843	-				-1.5
3,309,018	+				+0.3
3,309,095	+				-0.3
3,309,096	-				-0.4
3,309,100	-				-0.3
3,309,100	-				+0.2
3,309,136	-		ABI39_RS12605	0.14	-0.9
3,309,210	+		ABI39_RS12605	0.23	-0.0
3,309,211	-		ABI39_RS12605	0.23	-0.1
3,309,348	-		ABI39_RS12605	0.39	+0.1
3,309,387	+		ABI39_RS12605	0.44	+1.7
3,309,387	+		ABI39_RS12605	0.44	+1.1
3,309,388	-		ABI39_RS12605	0.44	+0.0
3,309,425	+		ABI39_RS12605	0.48	-0.5
3,309,573	-		ABI39_RS12605	0.66	+1.8
3,309,573	-		ABI39_RS12605	0.66	+0.7
3,309,573	-		ABI39_RS12605	0.66	+0.9
3,309,575	+		ABI39_RS12605	0.66	+0.4
3,309,576	-		ABI39_RS12605	0.66	+0.3
3,309,580	-		ABI39_RS12605	0.67	-0.2
3,309,583	-		ABI39_RS12605	0.67	+0.7
3,309,704	+		ABI39_RS12605	0.81	+0.1
3,309,704	+		ABI39_RS12605	0.81	-2.2
3,309,716	+		ABI39_RS12605	0.83	-0.1
3,309,717	-		ABI39_RS12605	0.83	+0.3
3,309,717	-		ABI39_RS12605	0.83	+1.5
3,309,887	-				+0.6
3,309,888	+				-0.9
3,309,905	-				+0.6
3,309,907	+				+0.3
3,310,005	+		ABI39_RS12610	0.10	+0.5
3,310,010	-		ABI39_RS12610	0.11	-0.2
3,310,148	+		ABI39_RS12610	0.20	-0.4
3,310,196	+		ABI39_RS12610	0.24	+1.9
3,310,321	+		ABI39_RS12610	0.32	+0.4
3,310,392	-		ABI39_RS12610	0.37	-0.2
3,310,524	+		ABI39_RS12610	0.46	-1.6
3,310,526	+		ABI39_RS12610	0.47	-0.3
3,310,547	+		ABI39_RS12610	0.48	+0.1
3,310,547	+		ABI39_RS12610	0.48	+0.1
3,310,548	-		ABI39_RS12610	0.48	-0.2
3,310,604	-		ABI39_RS12610	0.52	-0.8
3,310,615	+		ABI39_RS12610	0.53	+0.1
3,310,616	-		ABI39_RS12610	0.53	-0.9
3,310,616	-		ABI39_RS12610	0.53	-1.1