Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04275

Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	B-glucan from yeast; autoclaved 2.5 mg/ml (C)
1,201,859	-		ABI39_RS04270	0.35	+0.0
1,201,885	+		ABI39_RS04270	0.37	+0.3
1,201,933	-		ABI39_RS04270	0.41	+0.2
1,201,933	-		ABI39_RS04270	0.41	-0.8
1,202,015	-		ABI39_RS04270	0.47	+0.3
1,202,023	-		ABI39_RS04270	0.47	-0.4
1,202,133	+		ABI39_RS04270	0.55	-0.3
1,202,273	-		ABI39_RS04270	0.65	+0.7
1,202,290	+		ABI39_RS04270	0.67	+0.1
1,202,309	+		ABI39_RS04270	0.68	-0.1
1,202,323	+		ABI39_RS04270	0.69	+0.1
1,202,441	-		ABI39_RS04270	0.78	+0.8
1,202,447	-		ABI39_RS04270	0.78	+0.8
1,202,475	-		ABI39_RS04270	0.80	-0.5
1,202,617	+				+1.1
1,202,618	-				-0.1
1,202,812	-				-0.5
1,202,839	-				-0.7
1,202,845	-				+0.0
1,202,902	-		ABI39_RS04275	0.13	-0.3
1,202,903	+		ABI39_RS04275	0.13	-0.5
1,202,904	-		ABI39_RS04275	0.13	-0.7
1,202,907	+		ABI39_RS04275	0.13	-0.5
1,202,923	+		ABI39_RS04275	0.14	+0.0
1,202,924	-		ABI39_RS04275	0.14	-0.3
1,202,926	-		ABI39_RS04275	0.15	-0.4
1,202,941	-		ABI39_RS04275	0.16	-1.4
1,203,053	-		ABI39_RS04275	0.24	-0.2
1,203,086	+		ABI39_RS04275	0.27	+0.1
1,203,114	+		ABI39_RS04275	0.29	+0.0
1,203,136	-		ABI39_RS04275	0.30	-0.3
1,203,334	-		ABI39_RS04275	0.45	-1.4
1,203,538	-		ABI39_RS04275	0.60	-0.6
1,203,583	-		ABI39_RS04275	0.64	-1.1
1,203,589	+		ABI39_RS04275	0.64	-0.4
1,203,590	-		ABI39_RS04275	0.64	+0.9
1,203,635	+		ABI39_RS04275	0.68	-0.5
1,203,643	-		ABI39_RS04275	0.68	-0.2
1,203,721	-		ABI39_RS04275	0.74	-0.1
1,203,721	-		ABI39_RS04275	0.74	+0.0
1,203,721	-		ABI39_RS04275	0.74	-0.3
1,203,722	+		ABI39_RS04275	0.74	-1.8
1,203,723	-		ABI39_RS04275	0.74	+0.3
1,203,723	-		ABI39_RS04275	0.74	+0.4
1,203,723	-		ABI39_RS04275	0.74	-1.8
1,203,840	+		ABI39_RS04275	0.83	-1.2
1,203,848	+		ABI39_RS04275	0.84	+0.5
1,204,048	+				+0.5
1,204,049	-				-0.2
1,204,049	-				-1.4
1,204,056	+				-1.3
1,204,070	+				+0.0
1,204,260	-		ABI39_RS04280	0.23	-0.5
1,204,276	-		ABI39_RS04280	0.25	-0.9
1,204,276	-		ABI39_RS04280	0.25	-1.3
1,204,335	-		ABI39_RS04280	0.32	+2.1
1,204,381	-		ABI39_RS04280	0.38	-1.9
1,204,545	+		ABI39_RS04280	0.58	-2.6
1,204,546	-		ABI39_RS04280	0.58	+0.1
1,204,546	-		ABI39_RS04280	0.58	-2.6
1,204,647	+		ABI39_RS04280	0.70	-2.0
1,204,680	+		ABI39_RS04280	0.74	-2.6
1,204,803	-		ABI39_RS04280	0.88	-0.8
1,204,848	-				+1.2
1,204,851	+				+2.1
1,205,053	-				+0.7
1,205,057	-				-2.4