Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10345

Experiment: Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)
2,762,932	+		ABI39_RS10340	0.22	-0.1
2,762,960	-		ABI39_RS10340	0.24	-0.2
2,763,328	-		ABI39_RS10340	0.54	-0.8
2,763,360	+		ABI39_RS10340	0.57	+0.2
2,763,361	-		ABI39_RS10340	0.57	+1.3
2,763,439	-		ABI39_RS10340	0.63	-0.3
2,763,456	-		ABI39_RS10340	0.64	+0.1
2,763,494	+		ABI39_RS10340	0.67	-0.5
2,763,494	+		ABI39_RS10340	0.67	+0.3
2,763,494	+		ABI39_RS10340	0.67	+0.6
2,763,495	-		ABI39_RS10340	0.67	-1.6
2,763,502	-		ABI39_RS10340	0.68	-0.3
2,763,568	-		ABI39_RS10340	0.73	-0.3
2,763,633	+		ABI39_RS10340	0.79	-0.1
2,763,671	-		ABI39_RS10340	0.82	+0.4
2,763,671	-		ABI39_RS10340	0.82	-0.7
2,763,738	+		ABI39_RS10340	0.87	-0.5
2,763,851	-				-0.6
2,763,949	+				-0.1
2,764,049	-				-0.2
2,764,055	+				+0.1
2,764,214	+				+0.1
2,764,215	-				-0.0
2,764,218	+		ABI39_RS10345	0.10	+0.7
2,764,292	+		ABI39_RS10345	0.12	+0.4
2,764,465	-		ABI39_RS10345	0.18	+0.6
2,764,572	+		ABI39_RS10345	0.21	-0.2
2,764,578	+		ABI39_RS10345	0.22	+0.3
2,764,592	+		ABI39_RS10345	0.22	-0.1
2,764,723	+		ABI39_RS10345	0.26	+0.1
2,764,727	+		ABI39_RS10345	0.27	-0.5
2,764,813	+		ABI39_RS10345	0.29	-0.5
2,764,813	+		ABI39_RS10345	0.29	-0.0
2,764,868	+		ABI39_RS10345	0.31	+0.5
2,764,868	+		ABI39_RS10345	0.31	-0.1
2,764,989	-		ABI39_RS10345	0.35	+0.1
2,765,073	-		ABI39_RS10345	0.38	+0.4
2,765,193	-		ABI39_RS10345	0.42	-0.1
2,765,316	-		ABI39_RS10345	0.46	+0.5
2,765,414	+		ABI39_RS10345	0.49	+0.4
2,765,420	+		ABI39_RS10345	0.49	-0.3
2,765,426	+		ABI39_RS10345	0.49	+0.7
2,765,483	+		ABI39_RS10345	0.51	+0.7
2,765,618	+		ABI39_RS10345	0.55	+0.5
2,765,845	+		ABI39_RS10345	0.63	+0.4
2,766,167	-		ABI39_RS10345	0.73	+0.6
2,766,194	+		ABI39_RS10345	0.74	+0.2
2,766,407	+		ABI39_RS10345	0.81	-0.8
2,766,512	+		ABI39_RS10345	0.84	+0.4
2,766,532	+		ABI39_RS10345	0.85	+0.3
2,766,533	-		ABI39_RS10345	0.85	-1.6
2,766,656	-		ABI39_RS10345	0.89	+1.5
2,766,737	+				+0.1
2,766,844	+				+0.3
2,767,000	-				+0.4
2,767,095	-				-0.5
2,767,269	+		ABI39_RS10350	0.23	-1.1
2,767,343	+		ABI39_RS10350	0.29	-0.9
2,767,623	+		ABI39_RS10350	0.53	+0.2
2,767,651	-		ABI39_RS10350	0.55	-0.0
2,767,651	-		ABI39_RS10350	0.55	-0.2
2,767,989	+		ABI39_RS10350	0.84	+0.4
2,767,990	-		ABI39_RS10350	0.84	+0.4