Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS13925

Experiment: Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)
3,615,678	+		ABI39_RS13920	0.52	-0.5
3,615,809	+		ABI39_RS13920	0.59	-0.7
3,615,860	+		ABI39_RS13920	0.61	-1.7
3,615,860	+		ABI39_RS13920	0.61	+0.3
3,615,860	+		ABI39_RS13920	0.61	-1.1
3,615,860	+		ABI39_RS13920	0.61	+0.4
3,615,860	+		ABI39_RS13920	0.61	-0.4
3,615,860	+		ABI39_RS13920	0.61	-0.2
3,615,861	-		ABI39_RS13920	0.61	-2.9
3,615,863	-		ABI39_RS13920	0.62	-1.5
3,615,865	+		ABI39_RS13920	0.62	-0.5
3,615,865	+		ABI39_RS13920	0.62	+0.6
3,615,866	-		ABI39_RS13920	0.62	+0.5
3,615,868	-		ABI39_RS13920	0.62	-0.7
3,615,868	-		ABI39_RS13920	0.62	-0.4
3,616,014	+		ABI39_RS13920	0.69	+0.3
3,616,194	-		ABI39_RS13920	0.78	-0.8
3,616,323	+		ABI39_RS13920	0.84	-0.3
3,616,503	+				+0.2
3,616,640	-				+1.0
3,616,646	+				+0.5
3,616,653	+				+0.2
3,616,734	+				+0.1
3,616,735	-				-0.7
3,616,900	+		ABI39_RS13925	0.15	-0.3
3,616,910	+		ABI39_RS13925	0.15	-0.2
3,616,911	-		ABI39_RS13925	0.16	+0.1
3,616,922	-		ABI39_RS13925	0.16	-0.6
3,616,965	-		ABI39_RS13925	0.19	+1.3
3,617,038	-		ABI39_RS13925	0.23	-0.4
3,617,074	+		ABI39_RS13925	0.25	+0.1
3,617,099	+		ABI39_RS13925	0.26	-0.6
3,617,255	-		ABI39_RS13925	0.35	+0.2
3,617,255	-		ABI39_RS13925	0.35	-0.7
3,617,404	+		ABI39_RS13925	0.44	-0.2
3,617,405	-		ABI39_RS13925	0.44	-0.4
3,617,418	+		ABI39_RS13925	0.45	-1.5
3,617,419	-		ABI39_RS13925	0.45	-1.8
3,617,804	+		ABI39_RS13925	0.67	-0.5
3,617,850	-		ABI39_RS13925	0.69	-1.0
3,618,028	+		ABI39_RS13925	0.80	-0.2
3,618,029	-		ABI39_RS13925	0.80	+0.8
3,618,165	+		ABI39_RS13925	0.87	-0.6
3,618,165	+		ABI39_RS13925	0.87	-0.4
3,618,166	-		ABI39_RS13925	0.88	-1.2
3,618,260	-				+0.6
3,618,384	-				+0.3
3,618,406	-				-0.2
3,618,406	-				-0.1
3,618,408	+				-1.3
3,618,438	+		ABI39_RS22160	0.15	-0.7
3,618,450	+		ABI39_RS22160	0.19	+0.5
3,618,478	+		ABI39_RS22160	0.27	-0.0
3,618,619	-		ABI39_RS22160	0.69	-0.5
3,618,635	+		ABI39_RS22160	0.73	-0.2
3,618,658	+		ABI39_RS22160	0.80	+0.2
3,618,692	-				+0.0
3,618,840	-				+0.2
3,618,866	-				+0.3
3,618,868	-				-0.3
3,619,161	-		ABI39_RS13935	0.13	-0.0
3,619,191	+		ABI39_RS13935	0.14	-0.0