Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07190

Experiment: Pectic galactan from potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; filtered 2.5 mg/ml (C)
1,983,736	-		ABI39_RS07180	0.55	-0.1
1,983,788	-		ABI39_RS07180	0.63	+0.4
1,983,894	-		ABI39_RS07180	0.77	+0.3
1,983,894	-		ABI39_RS07180	0.77	+1.5
1,983,901	-		ABI39_RS07180	0.78	-3.7
1,984,715	-				+1.5
1,985,370	+		ABI39_RS07195	0.31	-0.2
1,985,371	-		ABI39_RS07195	0.31	-0.8
1,985,371	-		ABI39_RS07195	0.31	+0.4
1,985,372	+		ABI39_RS07195	0.31	+0.9
1,985,373	-		ABI39_RS07195	0.31	-0.1
1,985,468	+		ABI39_RS07195	0.42	+2.3
1,985,469	-		ABI39_RS07195	0.42	+0.9
1,985,593	-		ABI39_RS07195	0.55	+0.4
1,985,641	+		ABI39_RS07195	0.60	+0.6
1,985,669	+		ABI39_RS07195	0.63	-0.7
1,985,686	-		ABI39_RS07195	0.65	+4.4
1,985,846	+		ABI39_RS07195	0.83	-1.7
1,985,846	+		ABI39_RS07195	0.83	-0.6
1,985,965	+				+0.2