Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS13860

Experiment: Pectic galactan from potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; filtered 2.5 mg/ml (C)
3,602,269	+				-1.3
3,602,274	+				-3.2
3,602,274	+				-1.8
3,602,274	+				-1.9
3,602,398	+				-2.3
3,602,436	-				-0.8
3,602,441	+				-0.6
3,602,748	-		ABI39_RS13855	0.44	+0.4
3,602,749	+		ABI39_RS13855	0.45	-1.0
3,602,750	-		ABI39_RS13855	0.45	-0.1
3,602,807	+		ABI39_RS13855	0.53	-0.6
3,602,960	+		ABI39_RS13855	0.74	-0.8
3,602,975	+		ABI39_RS13855	0.76	+0.4
3,603,174	+				-2.0
3,603,228	+		ABI39_RS13860	0.12	+1.0
3,603,232	+		ABI39_RS13860	0.13	+0.3
3,603,462	+		ABI39_RS13860	0.45	+0.4
3,603,475	+		ABI39_RS13860	0.47	-0.6
3,603,572	-		ABI39_RS13860	0.61	+0.3
3,603,654	-		ABI39_RS13860	0.72	+2.1
3,603,743	-		ABI39_RS13860	0.85	+2.0
3,603,770	+		ABI39_RS13860	0.89	+0.4
3,603,780	+				+0.7
3,603,781	-				+1.4
3,604,051	+				-0.3
3,604,103	-				+0.7
3,604,218	+		ABI39_RS22150	0.60	-1.1
3,604,239	+		ABI39_RS22150	0.77	+0.5
3,604,287	-				+1.0
3,604,308	+				-0.1
3,604,583	+				-1.6