Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10620

Experiment: Pectic galactan from potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; filtered 2.5 mg/ml (C)
2,829,188	+		ABI39_RS10610	0.87	+0.7
2,829,242	+				-0.5
2,829,249	-				-1.1
2,829,313	+				-0.1
2,829,584	-		ABI39_RS10615	0.49	+2.0
2,829,659	-		ABI39_RS10615	0.61	+0.5
2,829,776	-		ABI39_RS10615	0.80	+0.3
2,829,804	-		ABI39_RS10615	0.84	+0.4
2,829,842	-				-0.3
2,830,172	+				-0.0
2,830,173	-				+0.7
2,830,188	-		ABI39_RS10620	0.10	+0.7
2,830,194	-		ABI39_RS10620	0.11	+1.4
2,830,199	+		ABI39_RS10620	0.11	+0.3
2,830,200	-		ABI39_RS10620	0.11	+0.9
2,830,398	+		ABI39_RS10620	0.25	-0.7
2,830,403	-		ABI39_RS10620	0.26	-0.2
2,830,403	-		ABI39_RS10620	0.26	+1.0
2,830,426	+		ABI39_RS10620	0.27	-0.9
2,830,451	+		ABI39_RS10620	0.29	-0.1
2,830,521	+		ABI39_RS10620	0.34	+2.5
2,830,668	-		ABI39_RS10620	0.45	-0.4
2,830,675	+		ABI39_RS10620	0.45	-0.2
2,830,760	+		ABI39_RS10620	0.51	+0.1
2,830,860	-		ABI39_RS10620	0.58	-0.7
2,830,873	+		ABI39_RS10620	0.59	+1.3
2,831,038	-		ABI39_RS10620	0.71	+0.3
2,831,072	+		ABI39_RS10620	0.73	+0.7
2,831,079	+		ABI39_RS10620	0.74	+0.1
2,831,079	+		ABI39_RS10620	0.74	+1.1
2,831,173	+		ABI39_RS10620	0.81	+0.1
2,831,218	+		ABI39_RS10620	0.84	+0.1
2,831,218	+		ABI39_RS10620	0.84	+1.2
2,831,303	+		ABI39_RS10620	0.90	+0.1
2,831,303	+		ABI39_RS10620	0.90	-0.7
2,831,304	-				+0.3
2,831,330	+				+0.5
2,831,345	-				+0.0
2,831,391	+				-1.1
2,831,392	-				-0.3
2,831,406	+				+0.2
2,831,437	+				+1.9
2,831,478	+				+1.2
2,831,708	-		ABI39_RS10625	0.40	+1.2
2,831,733	-		ABI39_RS10625	0.44	+0.2
2,831,768	-		ABI39_RS10625	0.49	+1.8
2,831,793	+		ABI39_RS10625	0.53	-0.5
2,831,864	+		ABI39_RS10625	0.64	-0.4
2,831,864	+		ABI39_RS10625	0.64	+0.8
2,831,889	+		ABI39_RS10625	0.68	-0.3
2,831,891	+		ABI39_RS10625	0.68	-1.4
2,831,894	-		ABI39_RS10625	0.69	+1.1
2,832,068	-				+0.3
2,832,071	+				+1.9
2,832,210	+				+0.5
2,832,211	-				+0.2
2,832,276	+				-2.8
2,832,355	-				-0.5
2,832,378	+				+1.4