Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS23175

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
2,288,671	-		ABI39_RS08585	0.74	+0.2
2,288,859	+		ABI39_RS08585	0.80	-0.2
2,288,969	-		ABI39_RS08585	0.84	-1.4
2,288,984	+		ABI39_RS08585	0.84	+0.8
2,289,121	-		ABI39_RS08585	0.89	-0.0
2,289,128	+		ABI39_RS08585	0.89	+0.0
2,289,164	-				+0.5
2,289,171	-				-0.1
2,289,319	-				-0.7
2,289,374	-				+0.0
2,289,377	-				-0.6
2,289,466	+				-1.2
2,289,481	+				+0.8
2,289,487	-				+0.2
2,289,502	-				+0.8
2,289,520	+				-1.9
2,289,596	+				+0.4
2,289,597	-				-0.1
2,289,597	-				-0.2
2,289,636	-				-0.4
2,289,646	+				+1.1
2,289,674	+				-1.8
2,289,674	+				-1.3
2,289,708	-				+0.4
2,289,973	-		ABI39_RS23175	0.16	-1.4
2,289,973	-		ABI39_RS23175	0.16	+0.6
2,290,112	+		ABI39_RS23175	0.21	-0.0
2,290,129	-		ABI39_RS23175	0.22	+0.4
2,290,387	+		ABI39_RS23175	0.31	-0.1
2,290,391	+		ABI39_RS23175	0.31	+0.4
2,290,454	+		ABI39_RS23175	0.33	+0.2
2,290,460	+		ABI39_RS23175	0.34	-0.7
2,290,469	-		ABI39_RS23175	0.34	+0.2
2,290,531	+		ABI39_RS23175	0.36	-1.3
2,290,616	-		ABI39_RS23175	0.39	+0.3
2,290,737	+		ABI39_RS23175	0.44	-2.4
2,290,738	-		ABI39_RS23175	0.44	-0.2
2,290,992	+		ABI39_RS23175	0.53	+0.4
2,290,993	-		ABI39_RS23175	0.53	-0.0
2,291,170	+		ABI39_RS23175	0.59	+0.0
2,291,171	-		ABI39_RS23175	0.59	-0.4
2,291,171	-		ABI39_RS23175	0.59	-1.5
2,291,175	-		ABI39_RS23175	0.59	-0.7
2,291,179	+		ABI39_RS23175	0.60	+0.4
2,291,247	-		ABI39_RS23175	0.62	-0.2
2,291,321	+		ABI39_RS23175	0.65	+1.0
2,291,351	+		ABI39_RS23175	0.66	-0.0
2,291,351	+		ABI39_RS23175	0.66	-0.8
2,291,440	+		ABI39_RS23175	0.69	+0.0
2,291,440	+		ABI39_RS23175	0.69	-0.2
2,291,758	+		ABI39_RS23175	0.81	+0.3
2,291,822	-		ABI39_RS23175	0.83	-0.4
2,291,871	-		ABI39_RS23175	0.85	-1.1
2,291,880	+		ABI39_RS23175	0.85	+0.3
2,291,903	-		ABI39_RS23175	0.86	-1.0
2,291,963	+		ABI39_RS23175	0.88	-1.4
2,292,025	-				-0.1
2,292,178	+				+0.3
2,292,182	-				-1.3
2,292,312	-				-0.3
2,292,335	-				+0.4
2,292,336	+				-0.0
2,292,476	-				-0.1
2,292,512	+				+0.8
2,292,512	+				-0.1
2,292,536	-				+0.4
2,292,698	-		ABI39_RS08595	0.28	-0.5
2,292,718	+		ABI39_RS08595	0.31	+0.0
2,292,856	+		ABI39_RS08595	0.51	+0.5
2,292,884	+		ABI39_RS08595	0.55	-1.3
2,292,903	+		ABI39_RS08595	0.57	-0.0
2,292,968	+		ABI39_RS08595	0.67	-0.1
2,293,087	-		ABI39_RS08595	0.84	+0.8
2,293,175	+				+0.2
2,293,175	+				-0.3
2,293,200	+				-0.9
2,293,214	+				-0.5
2,293,272	+				-0.7
2,293,286	+				+0.3
2,293,287	-				-2.0
2,293,289	-				+0.1