Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20095

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
4,963,399	+		ABI39_RS20085	0.74	-2.6
4,963,474	+		ABI39_RS20085	0.86	-3.1
4,963,497	-				-0.7
4,963,692	+		ABI39_RS20090	0.16	-1.4
4,963,802	+		ABI39_RS20090	0.30	-2.8
4,963,803	-		ABI39_RS20090	0.30	-0.1
4,963,803	-		ABI39_RS20090	0.30	-3.5
4,963,845	+		ABI39_RS20090	0.35	-1.8
4,963,855	-		ABI39_RS20090	0.36	-3.2
4,964,012	+		ABI39_RS20090	0.56	-2.7
4,964,013	-		ABI39_RS20090	0.56	-1.3
4,964,022	+		ABI39_RS20090	0.57	-3.1
4,964,089	+		ABI39_RS20090	0.66	-1.8
4,964,103	+		ABI39_RS20090	0.68	-1.7
4,964,128	-		ABI39_RS20090	0.71	-2.8
4,964,137	-		ABI39_RS20090	0.72	-0.4
4,964,142	+		ABI39_RS20090	0.73	-1.9
4,964,142	+		ABI39_RS20090	0.73	-0.6
4,964,142	+		ABI39_RS20090	0.73	-3.8
4,964,384	+				-3.9
4,964,395	+				-0.1
4,964,433	+				-2.9
4,964,434	-				-1.3
4,964,447	+				-2.8
4,964,512	-		ABI39_RS20095	0.16	-2.7
4,964,513	+		ABI39_RS20095	0.16	-2.1
4,964,514	-		ABI39_RS20095	0.16	-2.0
4,964,519	+		ABI39_RS20095	0.17	-0.4
4,964,520	-		ABI39_RS20095	0.17	-2.6
4,964,520	-		ABI39_RS20095	0.17	-2.1
4,964,544	-		ABI39_RS20095	0.19	-2.8
4,964,655	+		ABI39_RS20095	0.30	-2.7
4,964,679	+		ABI39_RS20095	0.33	-3.9
4,964,687	+		ABI39_RS20095	0.34	-4.5
4,964,717	+		ABI39_RS20095	0.37	-1.5
4,964,717	+		ABI39_RS20095	0.37	-3.2
4,964,717	+		ABI39_RS20095	0.37	-2.6
4,964,718	-		ABI39_RS20095	0.37	-3.3
4,964,793	+		ABI39_RS20095	0.44	-4.3
4,964,793	+		ABI39_RS20095	0.44	-2.7
4,964,794	-		ABI39_RS20095	0.44	-1.9
4,964,794	-		ABI39_RS20095	0.44	-3.3
4,964,824	-		ABI39_RS20095	0.47	-2.1
4,964,888	-		ABI39_RS20095	0.54	-2.5
4,964,985	-		ABI39_RS20095	0.64	-1.7
4,965,174	+		ABI39_RS20095	0.83	-3.7
4,965,174	+		ABI39_RS20095	0.83	-1.1
4,965,274	+				-3.8
4,965,275	-				-3.9
4,965,275	-				-1.4
4,965,275	-				-4.3
4,965,279	-				-3.7
4,965,324	+				-2.9
4,965,330	+				-3.4
4,965,336	-				-2.5
4,965,374	-				-1.1
4,965,374	-				-0.1
4,965,452	-				-2.3
4,965,452	-				-3.3
4,965,485	+				-2.8
4,965,517	+		ABI39_RS20100	0.12	-1.1
4,965,680	-		ABI39_RS20100	0.24	-3.1
4,965,818	-		ABI39_RS20100	0.34	-1.6
4,965,874	-		ABI39_RS20100	0.38	-2.4
4,965,894	-		ABI39_RS20100	0.40	-3.3
4,965,905	+		ABI39_RS20100	0.41	-3.0
4,966,295	+		ABI39_RS20100	0.70	-2.5
4,966,295	+		ABI39_RS20100	0.70	+1.9
4,966,296	-		ABI39_RS20100	0.70	-3.4
4,966,296	-		ABI39_RS20100	0.70	-2.8
4,966,296	-		ABI39_RS20100	0.70	-3.4
4,966,296	-		ABI39_RS20100	0.70	-1.4