Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19385

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
4,852,152	+				+0.1
4,852,160	+				+0.0
4,852,222	+				+0.6
4,852,261	+				+0.7
4,852,419	-		ABI39_RS19375	0.18	+0.3
4,852,486	-		ABI39_RS19375	0.32	-0.7
4,852,813	-				-0.3
4,852,813	-				-1.3
4,852,833	-				-0.5
4,852,966	+				+1.0
4,852,997	+				-2.3
4,853,075	-				+0.6
4,853,127	-				-1.1
4,853,155	+				-1.3
4,853,302	-		ABI39_RS19385	0.50	-2.3
4,853,313	+		ABI39_RS19385	0.53	-1.2
4,853,360	+		ABI39_RS19385	0.67	-1.3
4,853,430	-		ABI39_RS19385	0.87	-2.1
4,853,430	-		ABI39_RS19385	0.87	-2.5
4,854,335	-				+1.2
4,854,360	-				+0.3