Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17195

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
4,347,016	+		ABI39_RS17190	0.47	-0.6
4,347,022	-		ABI39_RS17190	0.48	-1.5
4,347,024	-		ABI39_RS17190	0.48	-0.1
4,347,029	+		ABI39_RS17190	0.49	+0.7
4,347,030	-		ABI39_RS17190	0.49	-0.3
4,347,064	+		ABI39_RS17190	0.52	+0.2
4,347,082	-		ABI39_RS17190	0.53	+0.5
4,347,098	+		ABI39_RS17190	0.55	+0.5
4,347,134	-		ABI39_RS17190	0.58	-1.6
4,347,167	-		ABI39_RS17190	0.61	+0.4
4,347,187	+		ABI39_RS17190	0.63	+0.0
4,347,188	-		ABI39_RS17190	0.63	-1.0
4,347,188	-		ABI39_RS17190	0.63	-1.1
4,347,195	-		ABI39_RS17190	0.63	+0.7
4,347,206	+		ABI39_RS17190	0.64	-0.6
4,347,340	+		ABI39_RS17190	0.76	-0.5
4,347,383	+		ABI39_RS17190	0.80	+0.2
4,347,429	+		ABI39_RS17190	0.84	-0.7
4,347,431	+		ABI39_RS17190	0.84	-0.4
4,347,431	+		ABI39_RS17190	0.84	-0.7
4,347,475	-		ABI39_RS17190	0.88	-0.5
4,347,499	+				+0.6
4,347,516	+				+1.7
4,347,584	+				-0.4
4,347,585	-				-1.1
4,347,590	+				-1.7
4,347,591	-				-1.0
4,347,749	+				-0.7
4,347,775	-				-0.4
4,347,867	+				-1.0
4,347,934	-				-2.1
4,348,017	-		ABI39_RS17195	0.10	-4.1
4,348,017	-		ABI39_RS17195	0.10	-3.9
4,348,051	-		ABI39_RS17195	0.13	-3.5
4,348,151	+		ABI39_RS17195	0.21	-3.9
4,348,234	+		ABI39_RS17195	0.28	-2.2
4,348,234	+		ABI39_RS17195	0.28	-2.8
4,348,250	-		ABI39_RS17195	0.29	-3.2
4,348,253	+		ABI39_RS17195	0.30	-3.2
4,348,279	-		ABI39_RS17195	0.32	-2.8
4,348,291	-		ABI39_RS17195	0.33	-2.7
4,348,320	+		ABI39_RS17195	0.35	-3.4
4,348,334	+		ABI39_RS17195	0.36	-1.5
4,348,347	+		ABI39_RS17195	0.37	-4.5
4,348,361	+		ABI39_RS17195	0.39	-1.9
4,348,399	+		ABI39_RS17195	0.42	-2.2
4,348,442	+		ABI39_RS17195	0.45	-2.8
4,348,443	-		ABI39_RS17195	0.45	-4.3
4,348,470	+		ABI39_RS17195	0.47	-2.7
4,348,499	-		ABI39_RS17195	0.50	-4.3
4,348,503	+		ABI39_RS17195	0.50	-5.3
4,348,539	+		ABI39_RS17195	0.53	-3.2
4,348,568	+		ABI39_RS17195	0.56	-2.8
4,348,568	+		ABI39_RS17195	0.56	-0.4
4,348,569	-		ABI39_RS17195	0.56	-3.8
4,348,670	+		ABI39_RS17195	0.64	-1.0
4,348,799	-		ABI39_RS17195	0.74	-2.3
4,348,817	+		ABI39_RS17195	0.76	-1.0
4,348,826	+		ABI39_RS17195	0.77	-3.0
4,348,854	+		ABI39_RS17195	0.79	-3.6
4,349,047	+				-3.2
4,349,048	-				-3.1
4,349,099	-				-4.9
4,349,141	+				-1.2
4,349,179	-				-0.2
4,349,188	-				-0.6