Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17160

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
4,339,846	+				-0.2
4,339,850	+				-2.0
4,339,851	-				+0.8
4,339,876	+				+0.2
4,339,884	-				+0.2
4,339,888	+				-0.8
4,339,918	-				-0.2
4,339,946	-		ABI39_RS17155	0.12	+0.8
4,340,205	+		ABI39_RS17155	0.38	-1.0
4,340,206	-		ABI39_RS17155	0.38	-0.2
4,340,431	-		ABI39_RS17155	0.61	-0.2
4,340,475	+		ABI39_RS17155	0.65	+0.2
4,340,816	+				+0.3
4,340,867	-				-0.2
4,340,973	+		ABI39_RS17160	0.13	-0.2
4,341,208	-		ABI39_RS17160	0.36	+0.2
4,341,228	-		ABI39_RS17160	0.38	-0.8
4,341,549	+		ABI39_RS17160	0.70	-0.5
4,341,646	+		ABI39_RS17160	0.79	-0.2
4,341,646	+		ABI39_RS17160	0.79	+0.2
4,341,646	+		ABI39_RS17160	0.79	+0.8
4,341,657	-		ABI39_RS17160	0.80	+0.8
4,341,664	-		ABI39_RS17160	0.81	-0.2
4,341,736	+		ABI39_RS17160	0.88	-1.0
4,341,808	-				-0.2
4,341,903	-				-1.0
4,341,970	+		ABI39_RS17165	0.14	+0.2
4,342,643	+				-1.2