Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15660

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
4,051,229	-		ABI39_RS15650	0.75	-1.4
4,051,229	-		ABI39_RS15650	0.75	-0.5
4,051,229	-		ABI39_RS15650	0.75	-4.4
4,051,349	-		ABI39_RS15650	0.84	-2.3
4,051,351	-		ABI39_RS15650	0.85	-1.6
4,051,355	+		ABI39_RS15650	0.85	+0.3
4,051,355	+		ABI39_RS15650	0.85	-1.6
4,051,418	-		ABI39_RS15650	0.90	-1.6
4,051,475	+				-1.2
4,051,477	+				-2.4
4,051,478	-				-0.8
4,051,484	-				-0.4
4,051,534	-				-3.3
4,051,552	-				-1.8
4,051,552	-				-0.8
4,051,552	-				+0.5
4,051,565	-				-1.8
4,051,565	-				-2.0
4,051,621	-		ABI39_RS15655	0.12	-2.5
4,051,676	+		ABI39_RS15655	0.22	+0.2
4,051,749	-		ABI39_RS15655	0.34	-2.7
4,051,818	+		ABI39_RS15655	0.46	+0.4
4,051,887	+		ABI39_RS15655	0.58	+0.7
4,052,104	+				+0.2
4,052,106	+				+1.4
4,052,141	-				-2.0
4,052,150	+				-1.4
4,052,181	-				+0.6
4,052,259	-				-1.8
4,052,318	-		ABI39_RS15660	0.13	+0.1
4,052,530	+		ABI39_RS15660	0.27	-2.3
4,052,561	-		ABI39_RS15660	0.29	-2.3
4,052,654	-		ABI39_RS15660	0.35	-1.4
4,052,667	+		ABI39_RS15660	0.36	-2.2
4,052,710	+		ABI39_RS15660	0.39	-2.7
4,052,786	-		ABI39_RS15660	0.44	-2.5
4,052,813	-		ABI39_RS15660	0.46	-0.9
4,052,817	+		ABI39_RS15660	0.46	-1.1
4,052,822	+		ABI39_RS15660	0.47	-3.5
4,052,830	+		ABI39_RS15660	0.47	-1.2
4,052,834	+		ABI39_RS15660	0.47	+0.5
4,052,867	+		ABI39_RS15660	0.50	-1.0
4,052,867	+		ABI39_RS15660	0.50	-0.9
4,052,937	-		ABI39_RS15660	0.54	-2.5
4,052,979	+		ABI39_RS15660	0.57	-2.0
4,053,021	-		ABI39_RS15660	0.60	-2.5
4,053,316	+		ABI39_RS15660	0.80	-1.3
4,053,317	-		ABI39_RS15660	0.80	-1.7
4,053,317	-		ABI39_RS15660	0.80	-2.0
4,053,356	-		ABI39_RS15660	0.82	-2.2
4,053,416	+		ABI39_RS15660	0.86	-0.8
4,053,416	+		ABI39_RS15660	0.86	-1.9
4,053,429	-		ABI39_RS15660	0.87	-1.4
4,053,545	+				-1.7
4,053,562	+				-1.3
4,053,563	-				-2.2
4,053,637	+				+0.9
4,053,638	-				-2.4
4,053,644	-				-0.5
4,053,681	+				-1.9
4,053,682	-				-0.9
4,053,951	+		ABI39_RS15665	0.34	-1.7
4,053,951	+		ABI39_RS15665	0.34	-2.0
4,053,951	+		ABI39_RS15665	0.34	-2.4
4,053,953	+		ABI39_RS15665	0.34	-2.6
4,053,955	+		ABI39_RS15665	0.34	-0.7
4,053,999	-		ABI39_RS15665	0.38	+0.3
4,054,218	+		ABI39_RS15665	0.60	-2.9
4,054,426	+		ABI39_RS15665	0.81	-2.6