Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11795

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
3,127,627	+		ABI39_RS11790	0.31	-0.4
3,127,912	+		ABI39_RS11790	0.52	+0.2
3,128,110	+		ABI39_RS11790	0.67	-0.3
3,128,122	+		ABI39_RS11790	0.68	-0.1
3,128,123	-		ABI39_RS11790	0.68	+1.0
3,128,231	-		ABI39_RS11790	0.76	-1.5
3,128,250	-		ABI39_RS11790	0.77	-1.4
3,128,308	+		ABI39_RS11790	0.82	-0.7
3,128,376	+		ABI39_RS11790	0.87	-0.7
3,128,442	+				-0.3
3,128,443	-				-0.9
3,128,461	+				+0.3
3,128,539	+				-0.2
3,128,541	+				-0.0
3,128,541	+				+0.4
3,128,541	+				-0.4
3,128,580	-				-0.7
3,128,652	-				-0.5
3,128,679	+				-0.7
3,128,680	-				+1.1
3,128,725	-		ABI39_RS11795	0.11	-0.2
3,128,757	-		ABI39_RS11795	0.14	-0.5
3,128,987	-		ABI39_RS11795	0.31	+2.5
3,129,105	-		ABI39_RS11795	0.41	+0.9
3,129,138	+		ABI39_RS11795	0.43	+0.1
3,129,380	-		ABI39_RS11795	0.62	-0.9
3,129,521	+		ABI39_RS11795	0.73	-0.8
3,129,595	+		ABI39_RS11795	0.78	-1.6
3,129,596	-		ABI39_RS11795	0.78	-1.0
3,129,596	-		ABI39_RS11795	0.78	-1.4
3,129,939	-				+0.7
3,130,108	+				+1.0
3,130,175	+		ABI39_RS22090	0.34	+0.2
3,130,175	+		ABI39_RS22090	0.34	-1.2
3,130,175	+		ABI39_RS22090	0.34	-0.9
3,130,176	-		ABI39_RS22090	0.35	+0.7
3,130,176	-		ABI39_RS22090	0.35	-0.0
3,130,222	+		ABI39_RS22090	0.62	-0.7
3,130,226	+		ABI39_RS22090	0.64	-1.7
3,130,288	+				-0.0
3,130,329	-				-1.4
3,130,332	+				-0.8
3,130,336	+				-1.0
3,130,344	+				+0.5
3,130,345	-				+1.8
3,130,357	+				+0.2
3,130,358	-				+0.0
3,130,439	+				-0.7
3,130,506	+				-0.2
3,130,547	+				-0.6
3,130,605	+				+0.5
3,130,605	+				-0.3
3,130,611	-				-1.0
3,130,659	+				-0.1
3,130,665	+				-0.2