Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS05215

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
1,454,416	+				+1.0
1,454,417	-				+0.0
1,454,620	+		ABI39_RS05210	0.25	-0.5
1,455,057	-		ABI39_RS05210	0.73	-0.4
1,455,057	-		ABI39_RS05210	0.73	+0.5
1,455,130	-		ABI39_RS05210	0.81	+0.2
1,455,168	+		ABI39_RS05210	0.85	+0.0
1,455,169	-		ABI39_RS05210	0.85	-0.1
1,455,218	-				-0.4
1,455,286	-				-0.7
1,455,328	+				+2.2
1,455,353	+				-0.8
1,455,627	+		ABI39_RS05215	0.64	+0.2
1,455,627	+		ABI39_RS05215	0.64	+0.2
1,455,631	+		ABI39_RS05215	0.65	+1.1
1,455,631	+		ABI39_RS05215	0.65	+0.5
1,455,737	+				+0.6
1,455,760	+				+0.8
1,455,982	+		ABI39_RS05220	0.19	-0.3
1,456,021	+		ABI39_RS05220	0.22	+0.0
1,456,022	-		ABI39_RS05220	0.22	+0.3
1,456,118	+		ABI39_RS05220	0.31	-0.2
1,456,126	+		ABI39_RS05220	0.32	+1.6
1,456,127	-		ABI39_RS05220	0.32	-0.2
1,456,130	-		ABI39_RS05220	0.32	+0.6
1,456,316	+		ABI39_RS05220	0.49	-0.4
1,456,321	-		ABI39_RS05220	0.49	-1.0
1,456,705	+		ABI39_RS05220	0.84	-0.4
1,456,729	+		ABI39_RS05220	0.86	+0.5