Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20740

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
5,115,198	-				-0.6
5,115,392	-				+0.3
5,115,434	-		ABI39_RS20735	0.13	+0.0
5,115,628	-		ABI39_RS20735	0.35	+0.2
5,115,648	+		ABI39_RS20735	0.38	-0.4
5,115,874	+		ABI39_RS20735	0.63	-1.1
5,115,878	+		ABI39_RS20735	0.64	+1.2
5,115,879	-		ABI39_RS20735	0.64	+2.6
5,116,141	-				+0.7
5,116,141	-				-0.1
5,116,251	-		ABI39_RS20740	0.21	-1.0
5,116,363	-		ABI39_RS20740	0.62	-1.7
5,116,365	+		ABI39_RS20740	0.62	+0.3
5,116,368	-		ABI39_RS20740	0.63	-2.2
5,116,412	-		ABI39_RS20740	0.79	+0.3
5,116,469	-				+0.6
5,116,501	-				+2.1
5,116,508	+				-1.5
5,116,509	-				+2.0
5,116,558	-				+0.1
5,116,616	-		ABI39_RS20745	0.14	+1.2
5,116,736	-		ABI39_RS20745	0.24	+0.4
5,116,774	+		ABI39_RS20745	0.28	-0.2
5,116,794	-		ABI39_RS20745	0.30	+0.3
5,116,798	-		ABI39_RS20745	0.30	+1.7
5,116,798	-		ABI39_RS20745	0.30	+0.2
5,116,826	+		ABI39_RS20745	0.33	+0.5
5,116,846	+		ABI39_RS20745	0.34	-2.0
5,116,849	+		ABI39_RS20745	0.35	+0.0
5,116,850	-		ABI39_RS20745	0.35	+0.8
5,116,850	-		ABI39_RS20745	0.35	-0.3
5,116,876	-		ABI39_RS20745	0.37	-0.8
5,116,919	-		ABI39_RS20745	0.41	+0.4
5,117,028	-		ABI39_RS20745	0.51	+1.3
5,117,153	-		ABI39_RS20745	0.62	+0.6
5,117,196	+		ABI39_RS20745	0.66	+0.8
5,117,196	+		ABI39_RS20745	0.66	+0.7
5,117,260	-		ABI39_RS20745	0.72	+1.4
5,117,305	+		ABI39_RS20745	0.76	-0.4