Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20660

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
5,090,146	-				-1.5
5,090,148	-				-0.2
5,090,148	-				-2.0
5,090,335	+				+0.6
5,090,352	+				+0.1
5,090,411	+				-0.3
5,090,452	-				-0.4
5,090,529	-		ABI39_RS20655	0.17	+0.1
5,090,563	-		ABI39_RS20655	0.25	-2.6
5,090,635	-		ABI39_RS20655	0.41	-0.3
5,090,685	+		ABI39_RS20655	0.52	-1.7
5,090,698	-		ABI39_RS20655	0.55	+0.1
5,090,723	-		ABI39_RS20655	0.61	-0.9
5,090,784	-		ABI39_RS20655	0.75	+0.2
5,090,788	-		ABI39_RS20655	0.76	+0.2
5,090,893	+				+1.1
5,090,977	-				+0.4
5,090,997	+				+0.8
5,091,125	-				+0.7
5,091,140	-				+0.5
5,091,143	+				-0.2
5,091,372	-				-0.5
5,091,576	-		ABI39_RS20660	0.19	-0.2
5,091,772	-		ABI39_RS20660	0.27	-0.6
5,091,788	-		ABI39_RS20660	0.28	-1.7
5,092,140	-		ABI39_RS20660	0.43	+0.1
5,092,161	+		ABI39_RS20660	0.44	-0.1
5,092,311	-		ABI39_RS20660	0.50	-0.9
5,092,314	-		ABI39_RS20660	0.50	+0.4
5,092,391	-		ABI39_RS20660	0.53	-0.3
5,092,595	-		ABI39_RS20660	0.62	-0.7
5,092,631	-		ABI39_RS20660	0.64	-0.5
5,092,786	+		ABI39_RS20660	0.70	-0.2
5,092,806	-		ABI39_RS20660	0.71	+0.1
5,092,836	+		ABI39_RS20660	0.72	+0.4
5,092,939	-		ABI39_RS20660	0.77	+0.8
5,092,967	+		ABI39_RS20660	0.78	+0.4
5,092,968	-		ABI39_RS20660	0.78	+0.4
5,092,970	+		ABI39_RS20660	0.78	-0.8
5,093,052	+		ABI39_RS20660	0.82	+0.3
5,093,052	+		ABI39_RS20660	0.82	-0.2
5,093,099	-		ABI39_RS20660	0.84	+0.5
5,093,138	+		ABI39_RS20660	0.85	-1.5
5,093,147	+		ABI39_RS20660	0.86	-0.9
5,093,177	+		ABI39_RS20660	0.87	-0.0
5,093,178	-		ABI39_RS20660	0.87	-0.9
5,093,183	+		ABI39_RS20660	0.87	-1.5
5,093,287	-				-0.7
5,093,353	+				-1.8
5,093,454	+				-2.1
5,093,462	+				+0.0
5,093,596	+				+0.1
5,093,642	-				-0.8
5,093,642	-				-0.3
5,093,704	-				-0.2
5,093,828	-				+0.4
5,093,842	-				-0.4
5,094,127	+		ABI39_RS20665	0.15	-0.0
5,094,219	-		ABI39_RS20665	0.18	+0.5
5,094,387	-		ABI39_RS20665	0.23	-0.2
5,094,471	-		ABI39_RS20665	0.25	-0.1