Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11050

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
2,958,597	-		ABI39_RS11045	0.37	+0.4
2,958,946	+		ABI39_RS11045	0.58	+1.0
2,958,947	-		ABI39_RS11045	0.58	+0.0
2,958,953	+		ABI39_RS11045	0.59	+1.1
2,958,977	+		ABI39_RS11045	0.60	+1.4
2,958,981	-		ABI39_RS11045	0.60	+1.1
2,959,052	-		ABI39_RS11045	0.65	+1.2
2,959,081	-		ABI39_RS11045	0.67	+2.4
2,959,162	+		ABI39_RS11045	0.72	+0.2
2,959,163	-		ABI39_RS11045	0.72	+0.8
2,959,201	+		ABI39_RS11045	0.74	+1.5
2,959,202	-		ABI39_RS11045	0.74	+1.3
2,959,284	+		ABI39_RS11045	0.79	+0.9
2,959,324	+		ABI39_RS11045	0.82	+0.3
2,959,402	-		ABI39_RS11045	0.86	+0.1
2,959,403	+		ABI39_RS11045	0.86	+1.0
2,959,413	+		ABI39_RS11045	0.87	+1.0
2,959,413	+		ABI39_RS11045	0.87	-0.3
2,959,413	+		ABI39_RS11045	0.87	+2.4
2,959,414	-		ABI39_RS11045	0.87	+0.7
2,959,414	-		ABI39_RS11045	0.87	-0.5
2,959,415	+		ABI39_RS11045	0.87	+0.5
2,959,562	+				+0.9
2,959,682	-		ABI39_RS11050	0.20	+1.1
2,959,695	-		ABI39_RS11050	0.23	+1.1
2,959,695	-		ABI39_RS11050	0.23	-0.7
2,959,699	+		ABI39_RS11050	0.24	+1.1
2,959,700	-		ABI39_RS11050	0.24	+0.3
2,959,709	-		ABI39_RS11050	0.26	+0.1
2,959,727	-		ABI39_RS11050	0.30	+1.2
2,959,742	-		ABI39_RS11050	0.33	-1.5
2,959,753	-		ABI39_RS11050	0.35	-0.8
2,959,804	+		ABI39_RS11050	0.46	+0.8
2,959,808	+		ABI39_RS11050	0.47	-1.3
2,959,810	+		ABI39_RS11050	0.48	+2.1
2,959,811	-		ABI39_RS11050	0.48	-0.3
2,959,856	+		ABI39_RS11050	0.58	+1.3
2,959,927	-		ABI39_RS11050	0.73	+2.6
2,959,928	+		ABI39_RS11050	0.73	+0.9
2,959,928	+		ABI39_RS11050	0.73	-0.5
2,959,928	+		ABI39_RS11050	0.73	+1.4
2,959,950	+		ABI39_RS11050	0.78	+2.1
2,959,972	+		ABI39_RS11050	0.83	+1.8
2,960,043	-				+0.4
2,960,082	+				+0.4
2,960,082	+				+1.7
2,960,083	-				+1.1
2,960,083	-				+0.5
2,960,205	-				-1.0
2,960,205	-				-0.3
2,960,218	-				+0.8
2,960,280	-				+0.3
2,960,280	-				+0.6
2,960,301	-				-0.0
2,960,318	+				+0.3
2,960,536	-				+0.9
2,960,620	+				+0.9
2,960,779	+		ABI39_RS11055	0.26	+0.5
2,960,837	-		ABI39_RS11055	0.34	+0.2
2,960,899	-		ABI39_RS11055	0.43	+0.4
2,960,914	+		ABI39_RS11055	0.45	+1.4
2,960,915	-		ABI39_RS11055	0.45	+0.2
2,960,945	+		ABI39_RS11055	0.50	+1.1
2,960,997	+		ABI39_RS11055	0.57	+0.7
2,960,998	-		ABI39_RS11055	0.57	+0.3