Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07860

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
2,125,454	-				-0.4
2,125,462	+				+0.8
2,125,560	+		ABI39_RS07855	0.39	+0.3
2,125,784	+				-0.1
2,125,947	+				-0.4
2,126,003	-				-0.4
2,126,033	+				+0.4
2,126,061	+				+0.2
2,126,199	+				-0.1
2,126,211	+				-0.3
2,126,212	-				-0.4
2,126,216	-				+0.2
2,126,233	-				+0.2
2,126,245	+				-0.3
2,126,364	+				+0.2
2,126,365	-				-0.5
2,126,370	-				-0.7
2,126,390	-				+0.4
2,126,406	+				+0.2
2,126,407	-				+0.4
2,126,500	-		ABI39_RS07860	0.14	-0.4
2,126,502	-		ABI39_RS07860	0.15	-1.3
2,126,505	-		ABI39_RS07860	0.15	+0.0
2,126,506	+		ABI39_RS07860	0.15	+1.5
2,126,534	+		ABI39_RS07860	0.19	+0.0
2,126,534	+		ABI39_RS07860	0.19	+0.3
2,126,535	-		ABI39_RS07860	0.19	-0.2
2,126,537	-		ABI39_RS07860	0.19	-0.1
2,126,618	+		ABI39_RS07860	0.29	-1.3
2,126,619	-		ABI39_RS07860	0.29	-0.1
2,126,639	+		ABI39_RS07860	0.31	-0.7
2,126,651	-		ABI39_RS07860	0.33	-0.0
2,126,659	+		ABI39_RS07860	0.34	-0.9
2,126,697	+		ABI39_RS07860	0.39	-0.8
2,126,747	-		ABI39_RS07860	0.45	-0.3
2,126,837	-		ABI39_RS07860	0.56	-0.8
2,126,847	+		ABI39_RS07860	0.57	+0.5
2,126,848	-		ABI39_RS07860	0.57	-1.0
2,126,947	+		ABI39_RS07860	0.70	-1.0
2,126,966	-		ABI39_RS07860	0.72	-0.2
2,126,977	+		ABI39_RS07860	0.73	-1.1
2,126,977	+		ABI39_RS07860	0.73	+0.5
2,127,012	-		ABI39_RS07860	0.78	-0.4
2,127,015	+		ABI39_RS07860	0.78	-0.4
2,127,016	-		ABI39_RS07860	0.78	-0.2
2,127,016	-		ABI39_RS07860	0.78	-0.7
2,127,042	+		ABI39_RS07860	0.81	-0.6
2,127,046	+		ABI39_RS07860	0.82	-0.4
2,127,072	+		ABI39_RS07860	0.85	+0.6
2,127,133	-				-0.7
2,127,216	-				+0.6
2,127,218	+				+1.3
2,127,219	-				+0.5
2,127,257	-		ABI39_RS07865	0.11	-0.2
2,127,309	-		ABI39_RS07865	0.20	-0.9
2,127,375	-		ABI39_RS07865	0.31	+0.2
2,127,382	+		ABI39_RS07865	0.32	-0.7
2,127,382	+		ABI39_RS07865	0.32	+0.5
2,127,453	+		ABI39_RS07865	0.44	-0.5
2,127,535	-		ABI39_RS07865	0.58	+0.3
2,127,535	-		ABI39_RS07865	0.58	+0.5
2,127,536	+		ABI39_RS07865	0.59	-0.9
2,127,536	+		ABI39_RS07865	0.59	+0.5
2,127,573	-		ABI39_RS07865	0.65	+0.8
2,127,614	-		ABI39_RS07865	0.72	-1.9
2,127,666	+		ABI39_RS07865	0.81	+0.5
2,127,667	-		ABI39_RS07865	0.81	+1.3
2,127,824	-				-0.2
2,127,848	+				-0.8
2,127,854	+				-0.4
2,127,890	+				+1.0
2,127,890	+				-0.5
2,127,891	-				-1.4
2,127,894	+				+0.6
2,127,895	-				-1.0
2,127,919	-				+0.2
2,127,986	-		ABI39_RS07870	0.13	+1.4
2,127,996	+		ABI39_RS07870	0.14	-0.5
2,128,004	-		ABI39_RS07870	0.15	-0.4
2,128,004	-		ABI39_RS07870	0.15	+0.5