Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14750

Experiment: Xylan from Beechwood; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood; autoclaved 2.5 mg/ml (C)
3,832,009	+		ABI39_RS14745	0.73	+0.2
3,832,081	-		ABI39_RS14745	0.79	+0.5
3,832,261	-				+1.4
3,832,261	-				-0.1
3,832,548	-				+0.6
3,832,590	+				-0.7
3,832,595	-				-2.2
3,832,723	+				+0.1
3,832,730	-				+0.9
3,832,816	-				-0.6
3,832,825	-				-0.3
3,832,931	+				+0.4
3,833,007	-				-0.6
3,833,133	+		ABI39_RS14750	0.23	+0.8
3,833,134	-		ABI39_RS14750	0.23	-0.9
3,833,202	+		ABI39_RS14750	0.31	-0.4
3,833,259	+		ABI39_RS14750	0.38	-2.9
3,833,259	+		ABI39_RS14750	0.38	-0.6
3,833,260	-		ABI39_RS14750	0.38	-0.7
3,833,302	-		ABI39_RS14750	0.43	-0.4
3,833,302	-		ABI39_RS14750	0.43	-3.0
3,833,346	-		ABI39_RS14750	0.48	-0.2
3,833,422	+		ABI39_RS14750	0.57	-0.6
3,833,449	-		ABI39_RS14750	0.60	-0.5
3,833,553	+		ABI39_RS14750	0.73	-0.6
3,833,599	-		ABI39_RS14750	0.78	-3.8
3,833,616	+		ABI39_RS14750	0.80	+0.2
3,833,640	+		ABI39_RS14750	0.83	+1.6
3,833,724	+				-1.2
3,833,736	+				-1.4
3,833,740	-				+0.3
3,833,740	-				+0.7
3,833,795	+				-0.1
3,833,827	-				+0.5
3,833,827	-				-0.2
3,833,864	-				-0.7
3,833,907	-				+0.8
3,833,907	-				-0.7
3,833,908	+				+1.5
3,833,911	-				+0.1
3,833,912	+				-0.9
3,833,913	-				-0.6
3,833,916	+				-0.2
3,833,917	-				-0.1
3,833,917	-				-0.1
3,833,960	+				+1.1
3,833,961	-				+0.9
3,833,961	-				+0.4
3,833,961	-				-0.9
3,833,967	+				+1.3
3,833,981	-				-0.7
3,833,981	-				-1.7
3,833,981	-				-0.0
3,833,985	+				-0.7
3,833,986	-				+0.0
3,834,025	+				+1.2
3,834,114	+				+0.1
3,834,115	-				+0.2
3,834,118	+				+0.9
3,834,136	+				+0.6
3,834,151	-				+0.7
3,834,151	-				+0.7
3,834,223	-				-0.1
3,834,227	-				+0.2
3,834,254	-				+0.7
3,834,258	-				-0.5
3,834,421	+				-0.2
3,834,422	-				-1.1
3,834,630	-		ABI39_RS14755	0.14	-1.0
3,834,673	+		ABI39_RS14755	0.16	-2.1
3,834,680	-		ABI39_RS14755	0.17	-2.1
3,834,689	-		ABI39_RS14755	0.17	-1.8
3,834,691	-		ABI39_RS14755	0.18	-0.1
3,834,729	+		ABI39_RS14755	0.20	-1.1