Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12590

Experiment: Xylan from Beechwood; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood; autoclaved 2.5 mg/ml (C)
3,304,006	-		ABI39_RS12585	0.66	+0.2
3,304,118	-		ABI39_RS12585	0.81	+0.0
3,304,152	+		ABI39_RS12585	0.85	+0.9
3,304,160	-		ABI39_RS12585	0.86	-1.2
3,304,171	+		ABI39_RS12585	0.88	-0.6
3,304,234	+				-1.5
3,304,235	-				-0.3
3,304,262	+				+1.5
3,304,268	+				+0.0
3,304,277	-				-0.8
3,304,280	+				-0.6
3,304,300	-				+1.9
3,304,332	+				-0.9
3,304,332	+				+0.2
3,304,332	+				-0.8
3,304,333	-				+0.1
3,304,333	-				+1.1
3,304,353	+				+1.3
3,304,380	+				-0.2
3,304,380	+				+0.2
3,304,424	+				+0.5
3,304,735	+				-0.2
3,304,852	-				+0.1
3,304,855	+				+0.2
3,304,856	-				+0.7
3,304,856	-				-0.4
3,304,858	-				+0.1
3,305,020	-				+1.0
3,305,095	+		ABI39_RS12590	0.16	+1.5
3,305,133	+		ABI39_RS12590	0.23	+1.0
3,305,173	+		ABI39_RS12590	0.30	+1.0
3,305,199	+		ABI39_RS12590	0.34	+0.2
3,305,223	+		ABI39_RS12590	0.39	+0.2
3,305,229	+		ABI39_RS12590	0.40	+0.1
3,305,292	+		ABI39_RS12590	0.51	+1.6
3,305,292	+		ABI39_RS12590	0.51	-0.0
3,305,316	+		ABI39_RS12590	0.55	+0.4
3,305,424	+		ABI39_RS12590	0.74	-0.2
3,305,553	+				-1.3
3,306,027	-				-0.0
3,306,031	+				-0.8
3,306,036	+				+0.0
3,306,041	-				-1.1
3,306,052	-				+0.6
3,306,111	-				-0.6
3,306,135	-				+0.1
3,306,202	+				-2.2
3,306,275	+				-0.2
3,306,275	+				+0.2
3,306,276	-				-1.0
3,306,278	+				+0.1
3,306,334	-				+0.1
3,306,357	-				-0.7
3,306,368	+				+0.3
3,306,432	-		ABI39_RS12600	0.11	-0.7