Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11680

Experiment: Xylan from Beechwood; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood; autoclaved 2.5 mg/ml (C)
3,101,820	-				-0.9
3,102,492	+				-0.2
3,102,596	-				+1.0
3,102,598	+				+1.5
3,102,650	+				+0.2
3,102,650	+				+0.0
3,102,651	-				+1.0
3,102,661	-				+0.6
3,102,665	-				-0.3
3,102,689	+				-2.0
3,102,778	-		ABI39_RS11680	0.11	+0.5
3,102,839	-		ABI39_RS11680	0.15	+2.6
3,102,887	-		ABI39_RS11680	0.18	+2.1
3,102,926	-		ABI39_RS11680	0.20	-2.0
3,103,051	+		ABI39_RS11680	0.28	+0.6
3,103,148	-		ABI39_RS11680	0.34	-0.1
3,103,199	-		ABI39_RS11680	0.37	+1.5
3,103,199	-		ABI39_RS11680	0.37	+0.4
3,103,224	+		ABI39_RS11680	0.38	+0.7
3,103,258	+		ABI39_RS11680	0.40	+1.0
3,103,265	-		ABI39_RS11680	0.41	+0.2
3,103,270	-		ABI39_RS11680	0.41	-1.3
3,103,642	+		ABI39_RS11680	0.64	+0.4
3,103,642	+		ABI39_RS11680	0.64	+0.1
3,103,643	-		ABI39_RS11680	0.64	+1.1
3,103,643	-		ABI39_RS11680	0.64	+1.2
3,103,643	-		ABI39_RS11680	0.64	+2.0
3,103,761	-		ABI39_RS11680	0.72	+2.1
3,103,837	+		ABI39_RS11680	0.76	+1.1
3,103,870	+		ABI39_RS11680	0.78	-0.0
3,103,871	-		ABI39_RS11680	0.78	+0.1
3,103,871	-		ABI39_RS11680	0.78	+0.9
3,103,939	+		ABI39_RS11680	0.83	-1.0
3,103,939	+		ABI39_RS11680	0.83	+0.7
3,103,996	+		ABI39_RS11680	0.86	-0.9
3,103,997	-		ABI39_RS11680	0.86	+1.1
3,104,048	+		ABI39_RS11680	0.89	-0.4
3,104,110	+				+1.1
3,104,110	+				-2.4
3,104,322	-				-0.6
3,104,354	-				+0.3
3,104,466	+				-2.0
3,104,486	+				+0.3
3,104,499	-				-0.6
3,104,517	+				+1.0
3,104,535	+				-0.3
3,104,555	-				-1.5
3,104,557	-				-0.7
3,104,587	+		ABI39_RS11685	0.12	+1.3
3,104,587	+		ABI39_RS11685	0.12	+0.4
3,104,688	+		ABI39_RS11685	0.18	-1.3
3,104,688	+		ABI39_RS11685	0.18	-1.5
3,104,713	+		ABI39_RS11685	0.20	-0.8
3,104,713	+		ABI39_RS11685	0.20	-4.7
3,104,713	+		ABI39_RS11685	0.20	-0.5
3,104,795	-		ABI39_RS11685	0.25	-0.5
3,104,795	-		ABI39_RS11685	0.25	-0.4
3,104,903	+		ABI39_RS11685	0.33	-1.6
3,105,038	-		ABI39_RS11685	0.42	-0.6
3,105,076	+		ABI39_RS11685	0.44	+0.9
3,105,191	+		ABI39_RS11685	0.52	+0.0
3,105,196	-		ABI39_RS11685	0.52	+1.0
3,105,196	-		ABI39_RS11685	0.52	+0.3