Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS05515

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
1,528,283	+				-0.2
1,528,594	-		ABI39_RS05505	0.35	-0.1
1,528,595	+		ABI39_RS05505	0.35	+0.1
1,528,595	+		ABI39_RS05505	0.35	+0.3
1,528,667	+		ABI39_RS05505	0.50	-0.2
1,528,672	+		ABI39_RS05505	0.50	+0.5
1,528,888	-				-1.5
1,528,945	+				-0.6
1,528,967	+				-0.7
1,529,271	-				-0.7
1,529,379	+				-0.3
1,529,446	+				-0.1
1,529,447	-				+0.4
1,529,616	+		ABI39_RS05515	0.11	+0.7
1,529,688	-		ABI39_RS05515	0.13	+0.3
1,529,857	+		ABI39_RS05515	0.18	-0.3
1,529,858	-		ABI39_RS05515	0.18	-0.2
1,529,984	+		ABI39_RS05515	0.22	+0.4
1,530,003	+		ABI39_RS05515	0.23	+1.1
1,530,091	-		ABI39_RS05515	0.26	-0.2
1,530,095	-		ABI39_RS05515	0.26	+0.2
1,530,095	-		ABI39_RS05515	0.26	+0.5
1,530,266	+		ABI39_RS05515	0.31	+0.4
1,530,288	+		ABI39_RS05515	0.32	+1.0
1,530,294	+		ABI39_RS05515	0.32	+1.1
1,530,400	+		ABI39_RS05515	0.35	+1.0
1,530,432	+		ABI39_RS05515	0.36	+0.4
1,530,467	+		ABI39_RS05515	0.37	-0.8
1,530,468	-		ABI39_RS05515	0.37	+0.4
1,530,495	+		ABI39_RS05515	0.38	-0.2
1,530,496	-		ABI39_RS05515	0.38	-0.4
1,530,496	-		ABI39_RS05515	0.38	+0.7
1,530,540	-		ABI39_RS05515	0.39	-0.4
1,531,098	-		ABI39_RS05515	0.57	-0.1
1,531,158	+		ABI39_RS05515	0.58	+0.1
1,531,225	+		ABI39_RS05515	0.60	+0.2
1,531,226	-		ABI39_RS05515	0.61	+0.6
1,531,226	-		ABI39_RS05515	0.61	+0.2
1,531,286	-		ABI39_RS05515	0.62	+0.7
1,531,397	+		ABI39_RS05515	0.66	+0.6
1,531,397	+		ABI39_RS05515	0.66	-0.2
1,531,398	-		ABI39_RS05515	0.66	+0.9
1,531,412	-		ABI39_RS05515	0.66	-0.9
1,531,437	+		ABI39_RS05515	0.67	-0.4
1,531,793	+		ABI39_RS05515	0.78	+0.6
1,531,858	+		ABI39_RS05515	0.80	+0.9
1,531,894	+		ABI39_RS05515	0.81	+0.2
1,532,016	-		ABI39_RS05515	0.85	-0.5
1,532,029	-		ABI39_RS05515	0.85	+0.7
1,532,134	+		ABI39_RS05515	0.88	+1.0
1,532,134	+		ABI39_RS05515	0.88	+2.8
1,532,189	+				+0.1
1,532,215	-				+0.2
1,532,243	-				+1.1
1,532,244	+				+1.7
1,532,245	-				+0.7
1,532,246	+				+1.4
1,532,276	+				+0.6
1,532,305	+				+0.3
1,532,509	-				-0.3
1,532,548	+				-0.3
1,532,577	-				-0.6
1,532,582	+				-0.4