Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09070

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
2,428,665	-		ABI39_RS09065	0.70	-0.7
2,428,665	-		ABI39_RS09065	0.70	-0.6
2,428,675	+		ABI39_RS09065	0.71	-1.6
2,428,729	-		ABI39_RS09065	0.72	+0.3
2,428,774	+		ABI39_RS09065	0.74	-0.6
2,428,782	+		ABI39_RS09065	0.74	-1.9
2,428,809	+		ABI39_RS09065	0.75	+0.3
2,428,810	-		ABI39_RS09065	0.75	-1.2
2,428,842	+		ABI39_RS09065	0.76	-0.1
2,428,842	+		ABI39_RS09065	0.76	-0.0
2,428,842	+		ABI39_RS09065	0.76	+0.7
2,428,843	-		ABI39_RS09065	0.76	+0.1
2,428,843	-		ABI39_RS09065	0.76	-0.9
2,428,981	-		ABI39_RS09065	0.80	-0.9
2,428,992	+		ABI39_RS09065	0.81	-0.1
2,429,058	+		ABI39_RS09065	0.83	+0.9
2,429,059	-		ABI39_RS09065	0.83	-1.8
2,429,115	+		ABI39_RS09065	0.84	+0.2
2,429,141	-		ABI39_RS09065	0.85	-0.5
2,429,230	+		ABI39_RS09065	0.88	-1.5
2,429,245	-		ABI39_RS09065	0.88	+0.0
2,429,311	+				+0.7
2,429,349	+				-0.9
2,429,396	+				+0.5
2,429,404	-				+0.5
2,429,514	-				-0.1
2,429,532	+				-1.5
2,429,555	-				-0.8
2,429,590	+				-0.7
2,429,654	-				+0.9
2,429,791	+				-1.8
2,429,873	+		ABI39_RS09070	0.12	-2.6
2,429,944	-		ABI39_RS09070	0.15	+1.4
2,429,947	+		ABI39_RS09070	0.15	+0.3
2,429,948	-		ABI39_RS09070	0.15	-0.3
2,429,991	+		ABI39_RS09070	0.17	-0.2
2,430,110	-		ABI39_RS09070	0.23	+1.1
2,430,126	+		ABI39_RS09070	0.23	-0.5
2,430,126	+		ABI39_RS09070	0.23	-0.3
2,430,228	+		ABI39_RS09070	0.28	+1.5
2,430,239	+		ABI39_RS09070	0.29	+0.8
2,430,239	+		ABI39_RS09070	0.29	+1.5
2,430,239	+		ABI39_RS09070	0.29	+0.7
2,430,404	+		ABI39_RS09070	0.36	-0.5
2,430,404	+		ABI39_RS09070	0.36	+1.0
2,430,472	-		ABI39_RS09070	0.39	+1.4
2,430,517	-		ABI39_RS09070	0.42	-0.9
2,430,606	+		ABI39_RS09070	0.46	+1.3
2,430,613	-		ABI39_RS09070	0.46	+2.2
2,430,679	-		ABI39_RS09070	0.49	+1.1
2,430,683	-		ABI39_RS09070	0.49	-0.5
2,430,861	+		ABI39_RS09070	0.57	+0.0
2,430,862	-		ABI39_RS09070	0.58	+1.1
2,430,900	-		ABI39_RS09070	0.59	-1.8
2,431,000	-		ABI39_RS09070	0.64	-0.6
2,431,009	-		ABI39_RS09070	0.64	-2.0
2,431,023	+		ABI39_RS09070	0.65	+1.4
2,431,030	-		ABI39_RS09070	0.65	+0.8
2,431,061	+		ABI39_RS09070	0.67	+0.2
2,431,327	-		ABI39_RS09070	0.79	-2.2
2,431,336	+		ABI39_RS09070	0.80	-2.1
2,431,369	+		ABI39_RS09070	0.81	+0.8
2,431,370	-		ABI39_RS09070	0.81	+0.3
2,431,404	-		ABI39_RS09070	0.83	+1.7
2,431,405	+		ABI39_RS09070	0.83	-0.1
2,431,406	-		ABI39_RS09070	0.83	-2.0
2,431,406	-		ABI39_RS09070	0.83	+0.4
2,431,642	+				-2.3
2,431,645	-				+1.3
2,431,664	-				-0.2
2,431,664	-				+1.0
2,431,703	-				-0.5
2,431,949	-				+1.2
2,431,974	+				-2.4
2,432,127	-				-1.4
2,432,200	+				-0.4
2,432,201	-				+0.1
2,432,207	+				+1.2
2,432,207	+				+0.7
2,432,208	-				-0.0
2,432,575	-		ABI39_RS09075	0.19	-0.2
2,432,660	+		ABI39_RS09075	0.24	-0.1
2,432,718	+		ABI39_RS09075	0.26	+1.6
2,432,769	+		ABI39_RS09075	0.29	+0.9
2,432,770	-		ABI39_RS09075	0.29	+0.3
2,432,771	+		ABI39_RS09075	0.29	-1.0
2,432,771	+		ABI39_RS09075	0.29	-2.5
2,432,772	-		ABI39_RS09075	0.29	+0.4
2,432,774	-		ABI39_RS09075	0.29	+0.3
2,432,774	-		ABI39_RS09075	0.29	-0.6