Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS22680
Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Starch soluble; autoclaved 2.5 mg/ml (C) |
---|---|---|---|---|---|
remove | |||||
2,061,516 | - | -1.3 | |||
2,061,529 | + | +0.1 | |||
2,061,601 | - | +0.2 | |||
2,061,706 | - | ABI39_RS07600 | 0.22 | +0.1 | |
2,061,754 | - | ABI39_RS07600 | 0.27 | -0.2 | |
2,061,759 | - | ABI39_RS07600 | 0.27 | +0.1 | |
2,061,759 | - | ABI39_RS07600 | 0.27 | -0.5 | |
2,061,858 | - | ABI39_RS07600 | 0.39 | -0.3 | |
2,062,161 | + | ABI39_RS07600 | 0.73 | -1.6 | |
2,062,162 | - | ABI39_RS07600 | 0.73 | -0.8 | |
2,062,253 | + | ABI39_RS07600 | 0.83 | -0.8 | |
2,062,294 | - | ABI39_RS07600 | 0.88 | -1.2 | |
2,062,390 | - | +1.2 | |||
2,062,391 | + | -0.1 | |||
2,062,392 | - | +0.8 | |||
2,062,392 | - | -0.4 | |||
2,062,394 | - | -0.1 | |||
2,062,396 | - | -0.4 | |||
2,062,396 | - | +1.3 | |||
2,062,431 | + | +0.7 | |||
2,062,469 | + | +0.5 | |||
2,062,470 | - | +0.5 | |||
2,062,494 | - | -0.1 |
Or see this region's nucleotide sequence