Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19950

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
4,929,854	+		ABI39_RS19945	0.36	-3.9
4,929,857	-		ABI39_RS19945	0.36	-3.5
4,929,882	+		ABI39_RS19945	0.38	-4.0
4,929,882	+		ABI39_RS19945	0.38	-3.9
4,929,888	+		ABI39_RS19945	0.38	-3.8
4,929,911	-		ABI39_RS19945	0.40	-2.9
4,929,955	+		ABI39_RS19945	0.43	-3.8
4,929,955	+		ABI39_RS19945	0.43	-2.8
4,930,008	+		ABI39_RS19945	0.47	-1.8
4,930,074	+		ABI39_RS19945	0.52	-2.8
4,930,131	-		ABI39_RS19945	0.57	-2.4
4,930,157	-		ABI39_RS19945	0.59	-2.8
4,930,178	+		ABI39_RS19945	0.60	-2.4
4,930,179	-		ABI39_RS19945	0.60	-2.5
4,930,208	-		ABI39_RS19945	0.62	-2.9
4,930,219	+		ABI39_RS19945	0.63	-2.1
4,930,321	+		ABI39_RS19945	0.71	-1.5
4,930,374	-		ABI39_RS19945	0.75	-1.3
4,930,476	-		ABI39_RS19945	0.83	-3.1
4,930,620	-				-3.4
4,930,908	+				-1.5
4,930,930	-		ABI39_RS19950	0.10	-3.0
4,930,987	-		ABI39_RS19950	0.15	-1.0
4,931,072	+		ABI39_RS19950	0.23	-2.3
4,931,087	+		ABI39_RS19950	0.24	-2.2
4,931,237	+		ABI39_RS19950	0.37	-2.5
4,931,363	+		ABI39_RS19950	0.48	-3.2
4,931,450	-		ABI39_RS19950	0.55	-2.6
4,931,450	-		ABI39_RS19950	0.55	-1.7
4,931,468	+		ABI39_RS19950	0.57	-3.2
4,931,469	-		ABI39_RS19950	0.57	-3.0
4,931,624	+		ABI39_RS19950	0.70	-2.2
4,931,625	-		ABI39_RS19950	0.70	-3.1
4,931,697	-		ABI39_RS19950	0.76	-1.7
4,931,697	-		ABI39_RS19950	0.76	-1.5
4,931,897	-				-3.0
4,932,203	-		ABI39_RS19955	0.33	+0.2
4,932,203	-		ABI39_RS19955	0.33	+0.3
4,932,247	+		ABI39_RS19955	0.42	+0.0
4,932,298	-		ABI39_RS19955	0.52	-0.5
4,932,298	-		ABI39_RS19955	0.52	+0.6
4,932,503	-				+0.1
4,932,503	-				+0.2
4,932,582	+				+0.6
4,932,604	+				+0.7
4,932,605	-				-0.2
4,932,753	+				-0.2
4,932,754	-				+0.2
4,932,767	-				+0.8
4,932,781	-				-0.8
4,932,818	+				-0.1
4,932,823	-				-0.7
4,932,833	-				-0.8
4,932,843	-				-1.6
4,932,866	+		ABI39_RS19960	0.10	-0.4
4,932,877	+		ABI39_RS19960	0.11	+0.5
4,932,879	+		ABI39_RS19960	0.11	-0.1
4,932,880	-		ABI39_RS19960	0.12	+1.8
4,932,880	-		ABI39_RS19960	0.12	+0.6
4,932,880	-		ABI39_RS19960	0.12	-0.5