Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17755

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
4,481,403	+				+0.7
4,481,519	+				+0.8
4,481,520	-				-0.5
4,481,656	-		ABI39_RS17745	0.65	-1.6
4,481,677	-		ABI39_RS17745	0.76	-2.2
4,481,766	+				-1.1
4,481,766	+				-1.7
4,481,775	+				-0.7
4,481,885	-		ABI39_RS17750	0.27	-2.2
4,482,056	-		ABI39_RS17750	0.54	-1.5
4,482,224	+		ABI39_RS17750	0.81	-1.5
4,482,375	+				-1.1
4,482,376	-				-0.6
4,482,419	-				-1.1
4,482,553	-		ABI39_RS17755	0.25	-1.2
4,482,766	+		ABI39_RS17755	0.53	-1.8
4,482,767	-		ABI39_RS17755	0.53	-1.8
4,483,140	+				+1.9
4,483,140	+				-0.9
4,483,172	-				-1.3
4,483,193	-				-1.7
4,483,194	+				-0.5
4,483,194	+				+0.6
4,483,195	-				-1.3
4,483,226	+				+0.5
4,483,254	+				+0.9
4,483,255	-				-1.8
4,483,264	-				-1.9
4,483,286	+				-0.0
4,483,309	-				-1.3
4,483,464	+		ABI39_RS17760	0.19	+0.7
4,483,567	-		ABI39_RS17760	0.25	-0.9
4,483,582	+		ABI39_RS17760	0.26	-0.4
4,483,587	-		ABI39_RS17760	0.26	-1.6
4,483,742	+		ABI39_RS17760	0.35	+0.3
4,483,925	+		ABI39_RS17760	0.46	+0.2
4,483,930	-		ABI39_RS17760	0.46	-1.3
4,483,953	-		ABI39_RS17760	0.48	-0.8
4,483,965	-		ABI39_RS17760	0.48	-2.3
4,483,965	-		ABI39_RS17760	0.48	-2.1
4,483,987	+		ABI39_RS17760	0.50	+0.5
4,483,988	-		ABI39_RS17760	0.50	-1.1
4,483,995	+		ABI39_RS17760	0.50	+0.3