Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS13845

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
3,596,689	-				+1.3
3,596,754	+		ABI39_RS13840	0.13	+0.4
3,596,755	-		ABI39_RS13840	0.13	+1.7
3,596,979	+		ABI39_RS13840	0.42	-0.9
3,597,012	-		ABI39_RS13840	0.46	-0.7
3,597,017	+		ABI39_RS13840	0.47	+0.9
3,597,085	-		ABI39_RS13840	0.55	+0.3
3,597,280	-		ABI39_RS13840	0.80	+0.7
3,597,337	+		ABI39_RS13840	0.87	-0.0
3,597,337	+		ABI39_RS13840	0.87	-1.1
3,597,338	-		ABI39_RS13840	0.88	+1.1
3,597,338	-		ABI39_RS13840	0.88	+0.0
3,597,417	-				+0.7
3,597,514	+				-0.3
3,597,517	-				+1.0
3,597,534	+				+0.9
3,597,607	-				+0.5
3,597,692	+				+2.0
3,597,780	-		ABI39_RS13845	0.60	-1.7
3,597,843	-				-0.7
3,597,946	-				-1.4
3,598,087	-				+0.1
3,598,089	-				-2.5
3,598,090	+				-0.3
3,598,124	-				-0.9
3,598,129	-				-3.2
3,598,381	+				-0.6
3,598,442	+		ABI39_RS13850	0.10	-0.3
3,598,510	+		ABI39_RS13850	0.12	-2.0
3,598,510	+		ABI39_RS13850	0.12	-0.1
3,598,510	+		ABI39_RS13850	0.12	+0.1
3,598,610	-		ABI39_RS13850	0.14	-0.7
3,598,613	-		ABI39_RS13850	0.14	+0.0
3,598,617	+		ABI39_RS13850	0.14	+0.7
3,598,618	-		ABI39_RS13850	0.14	-1.1
3,598,639	+		ABI39_RS13850	0.15	-0.5
3,598,639	+		ABI39_RS13850	0.15	+0.6
3,598,639	+		ABI39_RS13850	0.15	-1.6
3,598,681	-		ABI39_RS13850	0.16	-0.4
3,598,725	+		ABI39_RS13850	0.17	+0.9
3,598,730	-		ABI39_RS13850	0.17	-0.4
3,598,794	-		ABI39_RS13850	0.18	+0.1