Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10430

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
2,788,744	-		ABI39_RS10425	0.77	+0.1
2,788,806	-		ABI39_RS10425	0.84	+0.4
2,788,829	+		ABI39_RS10425	0.87	-0.7
2,788,843	-		ABI39_RS10425	0.89	+0.5
2,788,921	+				-0.0
2,788,921	+				-0.2
2,788,933	-				-0.7
2,788,963	-				-0.1
2,788,985	-				+0.6
2,789,028	+				-0.5
2,789,029	-				-0.4
2,789,258	+				-0.3
2,789,302	+				+0.5
2,789,303	-				-3.5
2,789,346	-				-5.4
2,789,348	+				-0.2
2,789,349	-				-3.1
2,789,350	+				+1.3
2,789,368	-				-3.7
2,789,383	+				+0.3
2,789,534	+				-4.7
2,789,535	-				-2.2
2,789,645	-				-2.2
2,789,681	+				-4.9
2,789,681	+				-5.4
2,789,761	+				-5.0
2,789,763	+				-4.3
2,789,763	+				-4.7
2,789,770	+				-4.0
2,789,856	+		ABI39_RS10430	0.13	-5.8
2,789,894	+		ABI39_RS10430	0.15	-3.3
2,789,894	+		ABI39_RS10430	0.15	-3.4
2,789,899	+		ABI39_RS10430	0.15	-4.4
2,789,900	-		ABI39_RS10430	0.15	-5.0
2,790,013	+		ABI39_RS10430	0.19	-3.2
2,790,196	+		ABI39_RS10430	0.27	-4.3
2,790,273	+		ABI39_RS10430	0.30	-3.4
2,790,297	-		ABI39_RS10430	0.31	-4.3
2,790,407	-		ABI39_RS10430	0.36	-2.7
2,790,722	+		ABI39_RS10430	0.49	-6.0
2,790,798	-		ABI39_RS10430	0.52	-4.6
2,790,953	-		ABI39_RS10430	0.58	-1.8
2,791,031	-		ABI39_RS10430	0.61	-4.2
2,791,076	-		ABI39_RS10430	0.63	-4.2
2,791,091	+		ABI39_RS10430	0.64	-3.9
2,791,153	+		ABI39_RS10430	0.66	-4.3
2,791,158	-		ABI39_RS10430	0.66	-3.5
2,791,164	-		ABI39_RS10430	0.67	-4.5
2,791,164	-		ABI39_RS10430	0.67	-3.5
2,791,191	-		ABI39_RS10430	0.68	-4.4
2,791,219	-		ABI39_RS10430	0.69	-4.0
2,791,239	-		ABI39_RS10430	0.70	-3.9
2,791,423	+		ABI39_RS10430	0.77	-4.4
2,791,468	+		ABI39_RS10430	0.79	-4.0
2,791,469	-		ABI39_RS10430	0.79	-3.9
2,791,604	+		ABI39_RS10430	0.85	-4.1
2,791,605	-		ABI39_RS10430	0.85	-4.8
2,791,828	-				-4.6
2,791,850	+				-4.5
2,791,853	-				-3.0
2,791,862	+				-4.7
2,791,971	+				-0.2
2,791,989	+				-4.3
2,792,065	-				-5.4
2,792,071	+				-5.9
2,792,072	-				-3.9
2,792,268	+		ABI39_RS10435	0.24	-4.3
2,792,272	-		ABI39_RS10435	0.24	-4.6
2,792,316	+		ABI39_RS10435	0.28	-3.5
2,792,400	-		ABI39_RS10435	0.35	-4.9
2,792,424	-		ABI39_RS10435	0.37	-5.0
2,792,545	-		ABI39_RS10435	0.47	-5.2
2,792,545	-		ABI39_RS10435	0.47	-3.9
2,792,629	-		ABI39_RS10435	0.54	-4.0
2,792,687	-		ABI39_RS10435	0.58	-1.6
2,792,696	+		ABI39_RS10435	0.59	-2.9
2,792,750	-		ABI39_RS10435	0.64	-4.4
2,792,795	-		ABI39_RS10435	0.67	-5.1
2,792,796	+		ABI39_RS10435	0.67	-4.6
2,792,800	-		ABI39_RS10435	0.68	-4.2
2,792,951	+		ABI39_RS10435	0.80	-5.9
2,792,963	-		ABI39_RS10435	0.81	-4.3