Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS05450

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
1,513,272	+				+0.7
1,513,297	-				+0.5
1,513,297	-				+0.0
1,513,299	-				+0.3
1,513,302	-				+0.1
1,513,306	+				-0.1
1,513,307	-				+0.6
1,513,309	-				+0.4
1,513,315	+				+0.0
1,513,320	-				-1.1
1,513,322	-				-0.1
1,513,326	+				+1.2
1,513,745	+		ABI39_RS05445	0.44	+0.9
1,513,749	+		ABI39_RS05445	0.45	-0.6
1,513,751	+		ABI39_RS05445	0.45	+0.7
1,513,752	-		ABI39_RS05445	0.46	+0.4
1,513,860	-		ABI39_RS05445	0.74	+0.7
1,513,863	+		ABI39_RS05445	0.74	-0.7
1,513,928	-				+0.0
1,513,928	-				-1.1
1,513,959	+				+1.0
1,513,959	+				-0.8
1,514,060	+				+0.1
1,514,085	-				-0.5
1,514,154	+				-1.4
1,514,456	+		ABI39_RS05450	0.27	-3.7
1,514,457	-		ABI39_RS05450	0.27	+0.2
1,514,516	-		ABI39_RS05450	0.32	-3.0
1,514,647	-		ABI39_RS05450	0.44	-1.5
1,514,660	+		ABI39_RS05450	0.45	-2.7
1,514,775	+		ABI39_RS05450	0.56	-2.6
1,514,816	+		ABI39_RS05450	0.59	-2.6
1,514,845	+		ABI39_RS05450	0.62	-2.4
1,515,160	-				-1.9
1,515,272	+				+0.5
1,515,294	-				+1.0
1,515,591	-		ABI39_RS05455	0.21	-0.1
1,515,682	+		ABI39_RS05455	0.31	-0.0
1,515,751	-		ABI39_RS05455	0.39	-0.4
1,515,751	-		ABI39_RS05455	0.39	-0.3
1,515,751	-		ABI39_RS05455	0.39	+1.2
1,515,757	-		ABI39_RS05455	0.40	+0.9
1,516,102	+		ABI39_RS05455	0.78	+0.6