Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04885

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
1,358,746	-		ABI39_RS04875	0.57	-0.8
1,358,781	+		ABI39_RS04875	0.64	+1.2
1,358,850	+		ABI39_RS04875	0.77	-0.1
1,358,958	+				+0.3
1,358,958	+				-0.2
1,358,981	+				+0.2
1,358,981	+				+0.3
1,358,982	-				+0.2
1,359,024	-		ABI39_RS21700	0.22	+0.4
1,359,087	+		ABI39_RS21700	0.48	-0.2
1,359,128	-		ABI39_RS21700	0.65	-1.1
1,359,145	-		ABI39_RS21700	0.73	+0.4
1,359,146	+		ABI39_RS21700	0.73	-0.5
1,359,242	+				+0.9
1,359,243	-				+1.2
1,359,257	-				-1.3
1,359,301	+				-0.3
1,359,301	+				-0.0
1,359,302	-				-0.1
1,359,305	+				-0.3
1,359,671	+				-0.4
1,359,671	+				-0.2
1,359,839	-				-0.4
1,359,839	-				+0.2
1,359,866	+				+1.2
1,359,871	-				-1.1
1,360,107	+		ABI39_RS04885	0.15	-0.8
1,360,164	+		ABI39_RS04885	0.17	-1.4
1,360,308	-		ABI39_RS04885	0.23	-1.6
1,360,992	+		ABI39_RS04885	0.49	-0.8
1,360,997	-		ABI39_RS04885	0.49	-1.4
1,361,039	+		ABI39_RS04885	0.50	-1.4
1,361,044	+		ABI39_RS04885	0.51	-0.8
1,361,044	-		ABI39_RS04885	0.51	+1.2
1,361,082	+		ABI39_RS04885	0.52	-2.2
1,361,110	+		ABI39_RS04885	0.53	-1.7
1,361,227	-		ABI39_RS04885	0.57	-0.4
1,361,246	+		ABI39_RS04885	0.58	-1.6
1,361,739	-		ABI39_RS04885	0.77	-1.1
1,361,808	-		ABI39_RS04885	0.80	-1.4
1,361,881	-		ABI39_RS04885	0.82	-1.8
1,362,006	-		ABI39_RS04885	0.87	-0.8
1,362,039	-		ABI39_RS04885	0.88	-0.8
1,362,139	-				-2.5
1,362,139	-				-0.8
1,362,173	+				-0.4
1,362,178	-				-1.8
1,362,266	-				+0.2
1,362,268	-				-3.0
1,362,290	+				+0.2
1,362,343	+				+0.9
1,362,356	+				+0.1
1,362,357	-				-0.4
1,362,388	-				-1.8
1,362,422	+				+0.3
1,362,423	-				-2.8
1,362,491	+		ABI39_RS04890	0.19	+0.4
1,362,615	+		ABI39_RS04890	0.39	-0.3
1,362,616	-		ABI39_RS04890	0.40	-2.4
1,362,665	+		ABI39_RS04890	0.47	+0.8
1,362,685	+		ABI39_RS04890	0.51	+0.8
1,362,694	+		ABI39_RS04890	0.52	+0.7
1,362,702	+		ABI39_RS04890	0.53	+1.0
1,362,708	+		ABI39_RS04890	0.54	+1.8
1,362,771	-		ABI39_RS04890	0.65	-1.3
1,362,813	+		ABI39_RS04890	0.72	+0.0
1,362,906	+		ABI39_RS04890	0.87	-0.0
1,362,935	+				+0.9
1,362,954	+				+0.7